RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 IFNA2P01563 188 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 IFNA21P01568 189 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 HRGP04196 525 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PTPN6P29350 595 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 ZNF143P52747 638 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 SMARCB1Q12824 385 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 E2F2Q14209 437 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 SLC9B2Q86UD5 537 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 KIAA0895Q8NCT3 520 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 DNAJC5Q9H3Z4 198 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 TMEM165Q9HC07 324 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 TDP1Q9NUW8 608 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 SLC24A2Q9UI40 661 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 A0A1W2PQH9 124 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 SCDO00767 359 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PRLRP16471 622 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PTPRAP18433 802 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RGS6P49758 472 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 GPR180Q86V85 440 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 YIPF7Q8N8F6 280 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 INO80EQ8NBZ0 244 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 GSTCDQ8NEC7 633 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 ZSWIM1Q9BR11 485 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 ZNF175Q9Y473 711 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 ALG5Q9Y673 324 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 A0A0G2JPF8 293 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 TCRBV5S4A2TA0A5A2 114 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 HNRNPCL3B7ZW38 293 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 E5RJQ4 531 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 H0Y8G0 127 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 HNRNPCL4P0DMR1 293 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 THRBP10828 461 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 CCNB1P14635 433 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 GRM2Q14416 872 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 FXNQ16595 210 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 ATAD3CQ5T2N8 411 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PIGXQ8TBF5 258 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 PWWP2AQ96N64 755 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 NECAB3Q96P71 396 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PCDH18Q9HCL0 1135 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 FAM118AQ9NWS6 357 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 IFT80Q9P2H3 777 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 UMODL1Q5DID0 1318 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RIMBP3CA6NJZ7 1639 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RIMBP3BA6NNM3 1639 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RIMBP3Q9UFD9 1639 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 A0A0G2JMP0 313 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 FGF19O95750 216 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 JUNP05412 331 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 IFI30P13284 250 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TYRP1P17643 537 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 GCNT6Q5T4J0 391 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 LCN1P1Q5VSP4 162 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 GPR107Q5VW38 600 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 GRHL2Q6ISB3 625 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 OR4M2Q8NGB6 313 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 OR1F2PQ96R84 312 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TTYH1Q9H313 450 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 CARS2Q9HA77 564 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 KBTBD4Q9NVX7 518 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 PDP1Q9P0J1 537 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 SSU72P8A0A1W2PR75 194 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 EME2A4GXA9 379 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 NPIPA2E9PIF3 369 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 NPIPA3F8WFD2 350 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 TRAFD1O14545 582 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 SLITRK3O94933 977 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 UNC5CO95185 931 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ADAP00813 363 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 STOMP27105 288 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 CORO1AP31146 461 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 NCBP2P52298 156 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHD3-202ENST00000358181 CLEC12AQ5QGZ9 265 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 RAB12Q6IQ22 244 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 DNAJB7Q7Z6W7 309 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 OR9K2Q8NGE7 335 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 UROC1Q96N76 676 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 LRFN5Q96NI6 719 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 MAP3K3Q99759 626 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 NOL11Q9H8H0 719 aaKnown RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 DNPEPQ9ULA0 475 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 CDK14O94921 469 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 FHP07954 510 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 NR2F6P10588 404 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 SDC2P34741 201 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 RALGPS2Q86X27 583 aaPredicted RBP9.61□□□□□ -0.87
CHD3-202ENST00000358181 KIF18BQ86Y91 864 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ZNF610Q8N9Z0 462 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.877e-8■■■□□ 17.1
CHD3-202ENST00000358181 ECHDC3Q96DC8 303 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 MSLNLQ96KJ4 702 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 NSMCE3Q96MG7 304 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 SGIP1Q9BQI5 828 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 ZNF180Q9UJW8 692 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 FRMPD4Q14CM0 1322 aa9.61□□□□□ -0.87
CHD3-202ENST00000358181 MSI1O43347 362 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms