RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SLC38A9Q8NBW4 561 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 OR52E1Q8NGJ3 308 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 ELMO1Q92556 727 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAPN3-204ENST00000356316 PPM1MQ96MI6 270 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 BAG1Q99933 345 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-204ENST00000356316 DPH2Q9BQC3 489 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-204ENST00000356316 NLNQ9BYT8 704 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 ING2Q9H160 280 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 OR52A5Q9H2C5 316 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 POLG2Q9UHN1 485 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 VPS4AQ9UN37 437 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 PLAAQ9Y263 795 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 PADI2Q9Y2J8 665 aa10.34□□□□□ -0.75
CAPN3-204ENST00000356316 TRBV5-4A0A0C4DH59 114 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 CCDC78A2IDD5 438 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 C9J4A7 227 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 BTN3A3O00478 584 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 AP2A1O95782 977 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 CD63P08962 238 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 OR56A5P0C7T3 313 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 MSL3P1P0C860 447 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ST6GAL1P15907 406 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 MSNP26038 577 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 STIP1P31948 543 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 SHMT2P34897 504 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 PPARGP37231 505 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ITGA1P56199 1179 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 PLOD1Q02809 727 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 BOP1Q14137 746 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 BRD3Q15059 726 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 SYTL3Q4VX76 610 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 KCTD11Q693B1 232 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 PPP1R21Q6ZMI0 780 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF517Q6ZMY9 492 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TAB3Q8N5C8 712 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ENDOVQ8N8Q3 282 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 LRRC57Q8N9N7 239 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ACRBPQ8NEB7 543 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TCTN2Q96GX1 697 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TRAPPC9Q96Q05 1148 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 C17orf62Q9BQA9 187 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TMEM121Q9BTD3 319 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 HGH1Q9BTY7 390 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TSSK1BQ9BXA7 367 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TRIM55Q9BYV6 548 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 KLHL25Q9H0H3 589 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 XKR8Q9H6D3 395 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 PIH1D1Q9NWS0 290 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 IRAK4Q9NWZ3 460 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ACTR10Q9NZ32 417 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 GPN3Q9UHW5 284 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TCFL5Q9UL49 500 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 ASF1AQ9Y294 204 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 TDRKHQ9Y2W6 561 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
CAPN3-204ENST00000356316 AP1M2Q9Y6Q5 423 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 SPTA1P02549 2419 aa10.33□□□□□ -0.76
CAPN3-204ENST00000356316 FLNCQ14315 2725 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 MROH6A6NGR9 719 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ERI2A8K979 691 aaKnown RBP10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF749O43361 778 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 OR2B3O76000 313 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 TMEM63AO94886 807 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 FTCDO95954 541 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PRSS56P0CW18 603 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 RRADP55042 308 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 CDH17Q12864 832 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 IL10RAQ13651 578 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ITIH4Q14624 930 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 DBN1Q16643 649 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PRAMEF17Q5VTA0 474 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 SPESP1Q6UW49 350 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 UNC5AQ6ZN44 842 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 MED25Q71SY5 747 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 RAB43Q86YS6 212 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 KLHDC8BQ8IXV7 354 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 SYTL1Q8IYJ3 562 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 TBC1D21Q8IYX1 336 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ADGRF3Q8IZF5 1079 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 FAM26EQ8N5C1 309 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 TMEM102Q8N9M5 508 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-204ENST00000356316 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 MIB2Q96AX9 1013 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 SGSM3Q96HU1 749 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PITPNM3Q9BZ71 974 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PCMTD2Q9NV79 361 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ANKMY1Q9P2S6 941 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ANAPC5Q9UJX4 755 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF148Q9UQR1 794 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 ZNF451Q9Y4E5 1061 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PCDHGB7Q9Y5F8 929 aa10.32□□□□□ -0.76
CAPN3-204ENST00000356316 PCDHGA9Q9Y5G4 932 aaKnown RBP10.32□□□□□ -0.76
CAPN3-204ENST00000356316 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
CAPN3-204ENST00000356316 A6NL46 340 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms