RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ATG7O95352 703 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 STAU1O95793 577 aaKnown RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 TSPAN12O95859 305 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 MT-CO1P00395 513 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 SLC2A3P11169 496 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 EFNA1P20827 205 aaPredicted RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 ZP3P21754 424 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 BMP8BP34820 402 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 KCNC1P48547 511 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 NR2C2P49116 596 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 GTF2A2P52657 109 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 MAB21L1Q13394 359 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 NFYCQ13952 458 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 SEMA3AQ14563 771 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 DENND1BQ6P3S1 775 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 BMP8AQ7Z5Y6 402 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 MIER2Q8N344 545 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 FOXJ1Q92949 421 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 ZNF669Q96BR6 464 aaPredicted RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 TBCDQ9BTW9 1192 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 PPIL3Q9H2H8 161 aaKnown RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 C3orf14Q9HBI5 128 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 PAK6Q9NQU5 681 aaPredicted RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 TMEFF2Q9UIK5 374 aaPredicted RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 MAPRE3Q9UPY8 281 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 INVSQ9Y283 1065 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 A0A1B0GVM2 712 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 PRR23AA6NEV1 266 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 F5H423 210 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 F8W036 122 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 GMDSO60547 372 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 CYP7B1O75881 506 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 MATN4O95460 622 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 RPS3P23396 243 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■■□ 21.3
RTN3-205ENST00000356000 OR4D2P58180 307 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 FLI1Q01543 452 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 GBX1Q14549 363 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 GPR19Q15760 415 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 PTCHD3Q3KNS1 767 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 RAB6CQ53S08 254 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 ZMAT1Q5H9K5 638 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 SLC35F1Q5T1Q4 408 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 SH3PXD2AQ5TCZ1 1133 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 GPR139Q6DWJ6 353 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 SPESP1Q6UW49 350 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 KDELC1Q6UW63 502 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 C3orf58Q8NDZ4 430 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 IPCEF1Q8WWN9 437 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 QKIQ96PU8 341 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■□□ 15.5
RTN3-205ENST00000356000 RAB6CQ9H0N0 254 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 DYRK4Q9NR20 520 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 EMC3Q9P0I2 261 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 CYB5R1Q9UHQ9 305 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 FKBP7Q9Y680 259 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 ZCWPW2A0A1B0GU75 182 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 FAM20BO75063 409 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 ATP5F1P24539 256 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 PGGT1BP53609 377 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 YWHAEP62258 255 aaKnown RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 QPRTQ15274 297 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 ZNF79Q15937 498 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 FUT11Q495W5 492 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 HABP4Q5JVS0 413 aaKnown RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 GALNT10Q86SR1 603 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 TMEM135Q86UB9 458 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 P3H2Q8IVL5 708 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 NLGN4YQ8NFZ3 816 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 ITFG1Q8TB96 612 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 FAM149B1Q96BN6 582 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 COQ8BQ96D53 544 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 ITCHQ96J02 903 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 TEPSINQ96N21 525 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 PGLYRP2Q96PD5 576 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 SRRQ9GZT4 340 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 C11orf54Q9H0W9 315 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 SAV1Q9H4B6 383 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.45■□□□□ 0.06
RTN3-205ENST00000356000 GLS2Q9UI32 602 aa15.45■□□□□ 0.06
RTN3-205ENST00000356000 LOC100506127A0A0U1RQW1 187 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 A0A1W2PP18 115 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 C9JVG2 144 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 KHNYNO15037 678 aaKnown RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 CST1P01037 141 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 KIR2DL3P43628 341 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 CCT3P49368 545 aaKnown RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 DGKQP52824 942 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 SNAP25P60880 206 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 TATDN3Q17R31 274 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 SOWAHCQ53LP3 525 aaPredicted RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 CAPN13Q6MZZ7 669 aaPredicted RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 BNIPLQ7Z465 357 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 C3orf30Q96M34 536 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 KCNS3Q9BQ31 491 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 CDH9Q9ULB4 789 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 RNF112Q9ULX5 631 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 TRAV6A0A075B6T7 132 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 A0A0A0MRY4 1105 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 CLRN2A0PK11 232 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 NT5C1B-RDH14C9J2C7 533 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms