RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 POLR2J3Q9H1A7 115 aaKnown RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 BRD7Q9NPI1 651 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 ASAH2Q9NR71 780 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 CLDN4O14493 209 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 C2P06681 752 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 GMPSP49915 693 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 DRICH1Q6PGQ1 229 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 LSM14AQ8ND56 463 aaKnown RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 MTMR9Q96QG7 549 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 CHIAQ9BZP6 476 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 COQ10BQ9H8M1 238 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 IFNA2P01563 188 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 CTBP2P56545 445 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 SPIN4Q56A73 249 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 FAM151BQ6UXP7 276 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 MOB2Q70IA6 237 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 TMPRSS11BQ86T26 416 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 ASB15Q8WXK1 588 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 EXO5Q9H790 373 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 FAM208AQ9UK61 1670 aaKnown RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 M0R129 80 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 PGLSO95336 258 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 MMP8P22894 467 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 CLCN4P51793 760 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 SLC30A6Q6NXT4 461 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 RALGPS2Q86X27 583 aaPredicted RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 PRDM12Q9H4Q4 367 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 TAS2R3Q9NYW6 316 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 A0A1B0GVM2 712 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 TCAF2A6NFQ2 919 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 SLC19A2O60779 497 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 GRIA2P42262 883 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 GARNL3Q5VVW2 1013 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 RD3Q7Z3Z2 195 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 CHERPQ8IWX8 916 aaKnown RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 ASCC1Q8N9N2 400 aaKnown RBP19.06■□□□□ 0.64
HDAC4-201ENST00000345617 ING5Q8WYH8 240 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 MXD1Q05195 221 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 FAM117BQ6P1L5 589 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 C16orf58Q96GQ5 468 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 IFT27Q9BW83 186 aa19.06■□□□□ 0.64
HDAC4-201ENST00000345617 H3BM21 787 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 VNN2O95498 520 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ERVK-8P63133 956 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF404Q494X3 552 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 RNASE12Q5GAN4 147 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 BANPQ8N9N5 519 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 SLC37A3Q8NCC5 494 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 SENP8Q96LD8 212 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 TFPIP10646 304 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 CDH13P55290 713 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ASF1AQ9Y294 204 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 SCN2BO60939 215 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 AMHP03971 560 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 HLA-DPB1P04440 258 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 HSD17B2P37059 387 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 MAP3K8P41279 467 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ABL2P42684 1182 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 GRK6P43250 576 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF709Q8N972 641 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 BPIFB1Q8TDL5 484 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 SOCS4Q8WXH5 440 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 HIST1H2AAQ96QV6 131 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 COMMD3Q9UBI1 195 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 CNOT6Q9ULM6 557 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 KLRC2P26717 231 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 FSTL4Q6MZW2 842 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 HASPINQ8TF76 798 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 KCNN1Q92952 543 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 LPIN3Q9BQK8 851 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 PHF24Q9UPV7 400 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 SLITRK5O94991 958 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ANXA4P09525 319 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 UGT2B10P36537 528 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 GSCP56915 257 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 TARDBPQ13148 414 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■■□ 23.3
HDAC4-201ENST00000345617 PAN2Q504Q3 1202 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF773Q6PK81 442 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 CNTN6Q9UQ52 1028 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 GDI2P50395 445 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 RPL7AP62424 266 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 CLCQ05315 142 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ZC3HC1Q86WB0 502 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 PDSS2Q86YH6 399 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ZFPM1Q8IX07 1006 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 PPP1R13LQ8WUF5 828 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 ULBP1Q9BZM6 244 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 CLDN11O75508 207 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 RYKP34925 604 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 MED27Q6P2C8 311 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 CIR1Q86X95 450 aaPredicted RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 HDAC2Q92769 488 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 FLRT1Q9NZU1 646 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 LAMA4Q16363 1823 aa19.05■□□□□ 0.64
HDAC4-201ENST00000345617 TPRP12270 2363 aaKnown RBP19.05■□□□□ 0.64
HDAC4-201ENST00000345617 PRKCDQ05655 676 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF423Q2M1K9 1284 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 IRF2BP2Q7Z5L9 587 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 CYP4X1Q8N118 509 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 TOP6BLQ8N6T0 577 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms