RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FUNDC2Q9BWH2 189 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 MCUBQ9NWR8 336 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 C1orf109Q9NX04 203 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 NEMP2A6NFY4 417 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 IRF6O14896 467 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 BUD23O43709 281 aaKnown RBP4.71□□□□□ -1.66
CSMD3-203ENST00000343508 MATN4O95460 622 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 PEPDP12955 493 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 CEACAM7Q14002 265 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 KCNA10Q16322 511 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 EXD2Q9NVH0 621 aa4.71□□□□□ -1.66
CSMD3-203ENST00000343508 PAK1IP1Q9NWT1 392 aaPredicted RBP4.71□□□□□ -1.66
CSMD3-203ENST00000343508 NHSQ6T4R5 1651 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PLOD2O00469 737 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ENDOD1O94919 500 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 GJB1P08034 283 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 FGF4P08620 206 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 STOMP27105 288 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ADORA2AP29274 412 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 THPOP40225 353 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TGM3Q08188 693 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SLC39A12Q504Y0 691 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 C6orf141Q5SZD1 244 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PGM2L1Q6PCE3 622 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TRMT11Q7Z4G4 463 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TRNT1Q96Q11 434 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 BRD9Q9H8M2 597 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 GPN2Q9H9Y4 310 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 AGO1Q9UL18 857 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SHROOM3Q8TF72 1996 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CCNB2O95067 398 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 NDST3O95803 873 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MYCLP1P12525 358 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 NSG1P42857 185 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 NUMBP49757 651 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 HSPA14Q0VDF9 509 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ELAVL2Q12926 359 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SNAPC1Q16533 368 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CYP2A13Q16696 494 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 C11orf96Q7Z7L8 435 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PQLC3Q8N755 202 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PHOX2BQ99453 314 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 AARSD1Q9BTE6 412 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ZNHIT2Q9UHR6 403 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 POMCP01189 267 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CATP04040 527 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MAGEA6P43360 314 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 HSPA7P48741 367 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CLCN4P51793 760 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MANFP55145 182 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SRSF11Q05519 484 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ANKRD26P1Q6NSI1 321 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 LINC00299Q6ZSB3 139 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PRSS48Q7RTY5 328 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ITIH5Q86UX2 942 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SH3YL1Q96HL8 342 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 GFM1Q96RP9 751 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SFMBT1Q9UHJ3 866 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 RNF6Q9Y252 685 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PRSS51A0A1B0GVH4 220 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 LCHNA4D1U4 455 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 C9JVG2 144 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 G3V2L1 256 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SDHDO14521 159 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 AP3D1O14617 1153 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 HOXA2O43364 376 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 GABBR2O75899 941 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CLIC3O95833 236 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 IFNW1P05000 195 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 IL7P13232 177 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 FBXW4P57775 412 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MFSD10Q14728 455 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 OR4K2Q8NGD2 314 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 C15orf40Q8WUR7 153 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 UFD1Q92890 307 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PPCDCQ96CD2 204 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 HMCESQ96FZ2 354 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CNDP2Q96KP4 475 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TSSK3Q96PN8 268 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 XYLT2Q9H1B5 865 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 HES2Q9Y543 173 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TCRBV3S1A0A5B6 114 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 NT5C1B-RDH14C9J2C7 533 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 INSIG1O15503 277 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PRLP01236 227 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 FYNP06241 537 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 FAM163BP0C2L3 166 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CBSLP0DN79 551 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 NR2F1P10589 423 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CBSP35520 551 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 OPRL1P41146 370 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ADAM15Q13444 863 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ACOX1Q15067 660 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SYT16Q17RD7 645 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SOWAHAQ2M3V2 549 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PRAMEF18Q5VWM3 479 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MAP1SQ66K74 1059 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CMTR2Q8IYT2 770 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ELMOD2Q8IZ81 293 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms