RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PDGFAP04085 211 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 MSNP26038 577 aaKnown RBP18.84■□□□□ 0.61
ITGA4-202ENST00000339307 CDC25BP30305 580 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 RPA4Q13156 261 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 BOP1Q14137 746 aaKnown RBP18.84■□□□□ 0.61
ITGA4-202ENST00000339307 PTCHD3Q3KNS1 767 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 FAM69BQ5VUD6 431 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 IZUMO3Q5VZ72 239 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 NAPRTQ6XQN6 538 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 DSELQ8IZU8 1212 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 OR52K1Q8NGK4 314 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 TRAPPC9Q96Q05 1148 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 SYTL2Q9HCH5 934 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 PRSS21Q9Y6M0 314 aa18.84■□□□□ 0.61
ITGA4-202ENST00000339307 TCRBV7S2A1N4TA0A589 114 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 E7EQ34 232 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 E7EVH7 732 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 AP2A2O94973 939 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 FTH1P02794 183 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 NSG1P42857 185 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 PTGIRP43119 386 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 CSE1LP55060 971 aaKnown RBP18.83■□□□□ 0.61
ITGA4-202ENST00000339307 PPP1R21Q6ZMI0 780 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 LINC00523Q86TU6 105 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 SYTL1Q8IYJ3 562 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 GPR135Q8IZ08 494 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 OR5AR1Q8NGP9 310 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.83■□□□□ 0.61
ITGA4-202ENST00000339307 LRFN5Q96NI6 719 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 IRAK4Q9NWZ3 460 aa18.83■□□□□ 0.61
ITGA4-202ENST00000339307 A0A0U1RQJ8 604 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 A6NL46 340 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 QSOX1O00391 747 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 LIN7AO14910 233 aaPredicted RBP18.83■□□□□ 0.6
ITGA4-202ENST00000339307 IFNB1P01574 187 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 GSTM1P09488 218 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 AGXTP21549 392 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 ITGA1P56199 1179 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 GSTM4Q03013 218 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 TRIM73Q86UV7 250 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 ADGRF3Q8IZF5 1079 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 EFCAB3Q8N7B9 438 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 SLC35B2Q8TB61 432 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 ATG4AQ8WYN0 398 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 TTC1Q99614 292 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 NLNQ9BYT8 704 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 PCMTD2Q9NV79 361 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 IMPACTQ9P2X3 320 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 TCFL5Q9UL49 500 aa18.83■□□□□ 0.6
ITGA4-202ENST00000339307 G3BP2Q9UN86 482 aaKnown RBP18.83■□□□□ 0.6
ITGA4-202ENST00000339307 CCDC162PA2VCL2 907 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 C9J4A7 227 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF185O15231 689 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF749O43361 778 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 TMEM63AO94886 807 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 RAB40ALP0C0E4 278 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 OR56A5P0C7T3 313 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 KLF1Q13351 362 aaPredicted RBP18.82■□□□□ 0.6
ITGA4-202ENST00000339307 SPESP1Q6UW49 350 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF517Q6ZMY9 492 aaPredicted RBP18.82■□□□□ 0.6
ITGA4-202ENST00000339307 UNC5AQ6ZN44 842 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 CDHR3Q6ZTQ4 885 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 KLHDC8BQ8IXV7 354 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 SPC24Q8NBT2 197 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 MIB2Q96AX9 1013 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 PITPNM3Q9BZ71 974 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 GRPEL1Q9HAV7 217 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 ANKMY1Q9P2S6 941 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 PLAGL1Q9UM63 463 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 ICKQ9UPZ9 632 aa18.82■□□□□ 0.6
ITGA4-202ENST00000339307 TNRC6AQ8NDV7 1962 aaKnown RBP18.81■□□□□ 0.6
ITGA4-202ENST00000339307 HECTD1Q9ULT8 2610 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 MROH6A6NGR9 719 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 VPS4BO75351 444 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 UGT2B7P16662 529 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 SHMT2P34897 504 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 RORAP35398 523 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 CDH17Q12864 832 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 ITIH4Q14624 930 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 DEFB110Q30KQ9 67 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF658BQ4V348 819 aaPredicted RBP18.81■□□□□ 0.6
ITGA4-202ENST00000339307 SEL1L2Q5TEA6 688 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 MLIPQ5VWP3 458 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 C19orf47Q8N9M1 422 aaKnown RBP18.81■□□□□ 0.6
ITGA4-202ENST00000339307 OR6P1Q8NGX9 317 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 HDAC10Q969S8 669 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 POLG2Q9UHN1 485 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 GPN3Q9UHW5 284 aaPredicted RBP18.81■□□□□ 0.6
ITGA4-202ENST00000339307 VPS4AQ9UN37 437 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF148Q9UQR1 794 aa18.81■□□□□ 0.6
ITGA4-202ENST00000339307 UBR5O95071 2799 aaPredicted RBP18.8■□□□□ 0.6
ITGA4-202ENST00000339307 HEATR9A2RTY3 570 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 ISM1B1AKI9 464 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 OR2B3O76000 313 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 HBQ1P09105 142 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 OTX2P32243 289 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 SNX1Q13596 522 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 LAMB3Q13751 1172 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 NADK2Q4G0N4 442 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF789Q5FWF6 425 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms