RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SIAH1Q8IUQ4 282 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 OR13J1Q8NGT2 312 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 AGAP4Q96P64 663 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 SEZ6LQ9BYH1 1024 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 UCK2Q9BZX2 261 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 ERVK13-1Q9NX77 482 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 SLC9A8Q9Y2E8 581 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 ATRNL1Q5VV63 1379 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 C9IYK1 514 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 UPK1BO75841 260 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 RHOQP17081 205 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 EPORP19235 508 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 CCL23P55773 120 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 SPPL2BQ8TCT7 592 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 RDH8Q9NYR8 311 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 PCDHGA11Q9Y5H2 935 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 KCNE2Q9Y6J6 123 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 NUPL2O15504 423 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SERPINA1P01009 418 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 YBEYP58557 167 aaPredicted RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 CDC42P60953 191 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 RPS3AP61247 264 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SOWAHAQ2M3V2 549 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 PLEKHG6Q3KR16 790 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SLC9A7Q96T83 725 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 AIFM2Q9BRQ8 373 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 NLNQ9BYT8 704 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 TIGARQ9NQ88 270 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 POLR3BQ9NW08 1133 aaPredicted RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 COL1A1P02452 1464 aaPredicted RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 MATN3O15232 486 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 RASAL1O95294 804 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 MXD1Q05195 221 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 USP39Q53GS9 565 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 BHLHB9Q6PI77 547 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 PHF10Q8WUB8 498 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 ESAMQ96AP7 390 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 DIRAS2Q96HU8 199 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 APOLD1Q96LR9 279 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SORT1Q99523 831 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 MRPL17Q9NRX2 175 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 NUFIP1Q9UHK0 495 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 ADAM30Q9UKF2 790 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 POLHQ9Y253 713 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 C22orf31O95567 290 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 PIGRP01833 764 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 UMPSP11172 480 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 GNPDA1P46926 289 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 LEPRP48357 1165 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 RHAGQ02094 409 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SGCGQ13326 291 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 RFX4Q33E94 735 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 HJURPQ8NCD3 748 aaPredicted RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 ROPN1LQ96C74 230 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 MMP27Q9H306 513 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 FBRSL1Q9HCM7 1045 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SLC35C2Q9NQQ7 365 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 KLHL1Q9NR64 748 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 CNTN6Q9UQ52 1028 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 PCDHGC4Q9Y5F7 938 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 C1RP00736 705 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 IGFBP5P24593 272 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 AQP1P29972 269 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 RABL3Q5HYI8 236 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SYPL2Q5VXT5 272 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 EIF3MQ7L2H7 374 aaKnown RBP15.8■□□□□ 0.12
NPHP3-201ENST00000337331 CCDC3Q9BQI4 270 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SERHL2Q9H4I8 314 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 SERHLQ9NQF3 203 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 TMEM39AQ9NV64 488 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 RPS6KB2Q9UBS0 482 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 CDH7Q9ULB5 785 aa15.8■□□□□ 0.12
NPHP3-201ENST00000337331 MYO9BQ13459 2157 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 OR6C75A6NL08 312 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SGTAO43765 313 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SNX4O95219 450 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 OR3A3P47888 321 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 LAPTM5Q13571 262 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 NAPRTQ6XQN6 538 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 CAND1Q86VP6 1230 aaKnown RBP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 FAM124BQ9H5Z6 455 aaPredicted RBP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 FZD10Q9ULW2 581 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 ATP6V1G2-DDX39BF2Z307 99 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 CLDN11O75508 207 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 TCF3P15923 654 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 GSTM2P28161 218 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 TIE1P35590 1138 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 POLR2JP52435 117 aaKnown RBP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 PGGT1BP53609 377 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 PURAQ00577 322 aaKnown RBP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 SP2Q02086 613 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 ATAD3CQ5T2N8 411 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 TSTD2Q5T7W7 516 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 RPS27LQ71UM5 84 aaKnown RBP15.79■□□□□ 0.12
NPHP3-201ENST00000337331 TIGD4Q8IY51 512 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 MTMR14Q8NCE2 650 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 POF1BQ8WVV4 589 aa15.79■□□□□ 0.12
NPHP3-201ENST00000337331 DEDD2Q8WXF8 326 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms