RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 GPR22Q99680 433 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 TRIM39Q9HCM9 518 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 AMBNQ9NP70 447 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 EIF2B3Q9NR50 452 aaKnown RBP6.37□□□□□ -1.39
HMG20A-201ENST00000336216 MRGBPQ9NV56 204 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 GIN1Q9NXP7 522 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMG20A-201ENST00000336216 VPS4AQ9UN37 437 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 GPSM3Q9Y4H4 160 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 PCDHGA4Q9Y5G9 962 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 DOCK5Q9H7D0 1870 aa6.37□□□□□ -1.39
HMG20A-201ENST00000336216 PHIPQ8WWQ0 1821 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CLDN25C9JDP6 229 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TBX1O43435 398 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ECI2O75521 394 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CST1P01037 141 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 APOA1P02647 267 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SLC35E2BP0CK96 405 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 FCGR1AP12314 374 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CYBAP13498 195 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 OXTRP30559 389 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 S100A5P33763 92 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SEC13P55735 322 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 FPGSQ05932 587 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TP53BP2Q13625 1128 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 MPPE1Q53F39 396 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ARSIQ5FYB1 569 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 KIAA0408Q6ZU52 694 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 GATAD2AQ86YP4 633 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CILP2Q8IUL8 1156 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 BBS7Q8IWZ6 715 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CMTR2Q8IYT2 770 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 KLHDC9Q8NEP7 349 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ANKRD49Q8WVL7 239 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SLC2A13Q96QE2 648 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TSPAN18Q96SJ8 248 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 OLFM1Q99784 485 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 RPF2Q9H7B2 306 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SMURF2Q9HAU4 748 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SUCOQ9UBS9 1254 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 LEF1Q9UJU2 399 aaPredicted RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 WDR37Q9Y2I8 494 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 Q9Y3F1 56 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SSC5DA1L4H1 1573 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 DICER1Q9UPY3 1922 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ASNA1O43681 348 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 GABBR2O75899 941 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 FADS2O95864 444 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 FYNP06241 537 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SLC10A3P09131 477 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ACADMP11310 421 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 KCNA5P22460 613 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 VARSP26640 1264 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 PPM1AP35813 382 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CD97P48960 835 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SULT2A1Q06520 285 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CHIT1Q13231 466 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SERINC3Q13530 473 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 LY6G5CQ5SRR4 150 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 PSRC1Q6PGN9 363 aaPredicted RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 MBOAT1Q6ZNC8 495 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TMEM135Q86UB9 458 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 OR8H2Q8N162 312 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 KDM1BQ8NB78 822 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 RDH11Q8TC12 318 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 CTPS2Q9NRF8 586 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 OSER1Q9NX31 292 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 AASSQ9UDR5 926 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 KCNE2Q9Y6J6 123 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 COL11A1P12107 1806 aaPredicted RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 APC2O95996 2303 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 HTR3EA5X5Y0 456 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 H3BM21 787 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF195O14628 629 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 GABRDO14764 452 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SNPHO15079 494 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 COL6A1P12109 1028 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 IDO1P14902 403 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 LAG3P18627 525 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SCNN1AP37088 669 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 MTHFRP42898 656 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 GNPDA1P46926 289 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 MAPKAPK2P49137 400 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 POLR2JP52435 117 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 NFATC3Q12968 1075 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SLC13A2Q13183 592 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 UAP1L1Q3KQV9 507 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ZC3H12BQ5HYM0 836 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TMEM236Q5W0B7 351 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TMEM220Q6QAJ8 160 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 PRR23CQ6ZRP0 262 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 TERB1Q8NA31 727 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 OR2T12Q8NG77 320 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 OR10G6Q8NH81 332 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 SCN3BQ9NY72 215 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ADGRE2Q9UHX3 823 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 NME7Q9Y5B8 376 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 RBBP6Q7Z6E9 1792 aaKnown RBP6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ATG2BQ96BY7 2078 aa6.36□□□□□ -1.39
HMG20A-201ENST00000336216 ZCWPW2A0A1B0GU75 182 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms