RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 HIST1H2AHQ96KK5 128 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 SERPINI1Q99574 410 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 HIST1H2AJQ99878 128 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 H2AFJQ9BTM1 129 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 C1orf50Q9BV19 199 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 BRINP2Q9C0B6 783 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 OR2AG1Q9H205 316 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 MAP10Q9P2G4 905 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 TRPS1Q9UHF7 1281 aa16.57■□□□□ 0.24
DDX41-201ENST00000330503 CCDC85CA6NKD9 419 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 FFAR3O14843 346 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 LSM1O15116 133 aaKnown RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 GPR42O15529 346 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 SYNCRIPO60506 623 aaKnown RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 XRCC1P18887 633 aaPredicted RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 CAPN3P20807 821 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 PTDSS1P48651 473 aaKnown RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 HNMTP50135 292 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 TAS2R38P59533 333 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 IRX1P78414 480 aaPredicted RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 SLC34A1Q06495 639 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 GRIK2Q13002 908 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 RPS6KA2Q15349 733 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 PTCHD3Q3KNS1 767 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 PREPLQ4J6C6 727 aaPredicted RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 FAM46CQ5VWP2 391 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 NEK5Q6P3R8 708 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 LRRC70Q7Z2Q7 622 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 CXorf40AQ8TE69 158 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 NRG4Q8WWG1 115 aa16.56■□□□□ 0.24
DDX41-201ENST00000330503 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 FARSBQ9NSD9 589 aaKnown RBP16.56■□□□□ 0.24
DDX41-201ENST00000330503 ARHGEF33A8MVX0 844 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 E7ENX8 843 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 MANBAO00462 879 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 NR5A2O00482 541 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 MID1O15344 667 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 GSTM1P09488 218 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 PDHA2P29803 388 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 MSX2P35548 267 aaPredicted RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 KIR2DL1P43626 348 aaPredicted RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 AP1S2P56377 157 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 UFM1P61960 85 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 GSTM4Q03013 218 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 CAMK2GQ13555 558 aaPredicted RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 CCDC6Q16204 474 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 VPS26BQ4G0F5 336 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 BCL7AQ4VC05 210 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 ATP6AP1LQ52LC2 224 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 RNF165Q6ZSG1 346 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 CHPFQ8IZ52 775 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 PLA2G15Q8NCC3 412 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 GLMNQ92990 594 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 TMEM159Q96B96 161 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 PYCR2Q96C36 320 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 TACO1Q9BSH4 297 aaKnown RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 TRIM39Q9HCM9 518 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 ATXN10Q9UBB4 475 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 ZNHIT2Q9UHR6 403 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 PRAMEF4O60810 478 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 PBLDP30039 288 aaPredicted RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 MTHFRP42898 656 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 TNFRSF4P43489 277 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 MS4A2Q01362 244 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 EMX2Q04743 252 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 SYTL3Q4VX76 610 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 PDCD4Q53EL6 469 aaKnown RBP16.55■□□□□ 0.24
DDX41-201ENST00000330503 PRAMEF9Q5VWM5 478 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 AAGABQ6PD74 315 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 LAYNQ6UX15 382 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 EP400NLQ6ZTU2 488 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 SLC22A15Q8IZD6 547 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 RNF148Q8N7C7 305 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 FNDC5Q8NAU1 212 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 FBXL8Q96CD0 374 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 S100A14Q9HCY8 104 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 CLDND1Q9NY35 253 aa16.55■□□□□ 0.24
DDX41-201ENST00000330503 FKBP6O75344 327 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 WDR47O94967 919 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 CLDN9O95484 217 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 ANPEPP15144 967 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 PFN3P60673 137 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 CST6Q15828 149 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 CCSMST1Q4G0I0 132 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 AGBL4Q5VU57 503 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.54■□□□□ 0.24
DDX41-201ENST00000330503 NUDT18Q6ZVK8 323 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 TRIM46Q7Z4K8 759 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 ZNF547Q8IVP9 402 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.54■□□□□ 0.249e-7■■■■■ 51.2
DDX41-201ENST00000330503 ZNF513Q8N8E2 541 aaPredicted RBP16.54■□□□□ 0.24
DDX41-201ENST00000330503 LRCH3Q96II8 777 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 ATG10Q9H0Y0 220 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 HEBP1Q9NRV9 189 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 STOML1Q9UBI4 398 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 KLQ9UEF7 1012 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 CROTQ9UKG9 612 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms