RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SPATS1Q496A3 300 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 DET1Q7L5Y6 550 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 ISG20Q96AZ6 181 aaKnown RBP13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 SLC47A1Q96FL8 570 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.2
ATP2C1-201ENST00000328560 PGRP06401 933 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 NFATC2Q13469 925 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 LAPTM4AQ15012 233 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 MEP1AQ16819 746 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 CHST9Q7L1S5 443 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 TSPAN33Q86UF1 283 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 ZBTB2Q8N680 514 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 TET1Q8NFU7 2136 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 CAPNS2Q96L46 248 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 UGT2B28Q9BY64 529 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 ELOVL7A1L3X0 281 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 ANKRD28O15084 1053 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 PGLSO95336 258 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 HNRNPCP07910 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 MYCLP1P12525 358 aaPredicted RBP13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 EPB42P16452 691 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 VAC14Q08AM6 782 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 TCTN1Q2MV58 587 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 TXNDC8Q6A555 127 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 RIMKLAQ8IXN7 391 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 GTF2H4Q92759 462 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 ASIC4Q96FT7 647 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 PARVBQ9HBI1 364 aa13.77□□□□□ -0.21
ATP2C1-201ENST00000328560 MAN1A2O60476 641 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 TULP3O75386 442 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 PARNO95453 639 aaKnown RBP13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 MATN1P21941 496 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 HSPA14Q0VDF9 509 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 R3HCC1LQ7Z5L2 792 aaKnown RBP13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ALDH16A1Q8IZ83 802 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 C8orf59Q8N0T1 100 aaPredicted RBP13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 PLGRKTQ9HBL7 147 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ARL15Q9NXU5 204 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 GLYATL1P3A0A0U1RQE8 302 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 UPK3BL1B0FP48 263 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 UPK3BL2E5RIL1 263 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 UPK1AO00322 258 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 CXCR6O00574 342 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 NPPAP01160 153 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ALPLP05186 524 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 HNF1BP35680 557 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 SPIDRQ14159 915 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 MYBPC3Q14896 1274 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 THAP5Q7Z6K1 395 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF555Q8NEP9 628 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 FAM120BQ96EK7 910 aaKnown RBP13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 CD244Q9BZW8 370 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 C8orf4Q9NR00 106 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 SLC6A13Q9NSD5 602 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 H7C0S8 307 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ARNTLO00327 626 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 C7P10643 843 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 BPIP17213 487 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 HLCSP50747 726 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ZC3H7AQ8IWR0 971 aaKnown RBP13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 PXYLP1Q8TE99 480 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 ITCHQ96J02 903 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 SLC25A37Q9NYZ2 338 aa13.76□□□□□ -0.21
ATP2C1-201ENST00000328560 H0Y858 1186 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 K7EPI3 171 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 SH3BGRLO75368 114 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 JAK1P23458 1154 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 LDLRAP1Q5SW96 308 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 SNX20Q7Z614 316 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 GALNT5Q7Z7M9 940 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 BEGAINQ9BUH8 593 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 YIPF1Q9Y548 306 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 PCDHGA8Q9Y5G5 932 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 LAMA2P24043 3122 aaKnown RBP13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 STK16O75716 305 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF682O95780 498 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 PIGAP37287 484 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 GTF2H3Q13889 308 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 BROXQ5VW32 411 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 RFLNAQ6ZTI6 216 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 FRS2Q8WU20 508 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 RHBDF1Q96CC6 855 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 OARD1Q9Y530 152 aa13.75□□□□□ -0.21
ATP2C1-201ENST00000328560 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms