RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 FRS2Q8WU20 508 aa12.47□□□□□ -0.41
VANGL1-201ENST00000310260 SPATA13Q96N96 652 aa12.47□□□□□ -0.41
VANGL1-201ENST00000310260 GPN2Q9H9Y4 310 aaPredicted RBP12.47□□□□□ -0.41
VANGL1-201ENST00000310260 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
VANGL1-201ENST00000310260 CCM2LQ9NUG4 571 aaPredicted RBP12.47□□□□□ -0.41
VANGL1-201ENST00000310260 ERVK-11Q9UQG0 969 aa12.47□□□□□ -0.41
VANGL1-201ENST00000310260 WDFY4Q6ZS81 3184 aa12.47□□□□□ -0.41
VANGL1-201ENST00000310260 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 CLOCKO15516 846 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 RSL1D1O76021 490 aaKnown RBP12.46□□□□□ -0.41
VANGL1-201ENST00000310260 RASAL1O95294 804 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 EIF2S1P05198 315 aaKnown RBP12.46□□□□□ -0.41
VANGL1-201ENST00000310260 APOA4P06727 396 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 POLBP06746 335 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 C7P10643 843 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 COL9A1P20849 921 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 PCYT1AP49585 367 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 DSC2Q02487 901 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 INO80DQ53TQ3 878 aaPredicted RBP12.46□□□□□ -0.41
VANGL1-201ENST00000310260 SPANXN3Q5MJ09 141 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 C9orf64Q5T6V5 341 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.41
VANGL1-201ENST00000310260 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
VANGL1-201ENST00000310260 ZNF567Q8N184 647 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 ABHD11Q8NFV4 315 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 OR2A12Q8NGT7 310 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 RAB2BQ8WUD1 216 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 HMGB4Q8WW32 186 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 ZNF599Q96NL3 588 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 HHIPQ96QV1 700 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 CSF3RQ99062 836 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 SEMA3CQ99985 751 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 PRSS16Q9NQE7 514 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 SPATA6Q9NWH7 488 aaPredicted RBP12.46□□□□□ -0.41
VANGL1-201ENST00000310260 LHX3Q9UBR4 397 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 TRAF6Q9Y4K3 522 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.41
VANGL1-201ENST00000310260 CAPGP40121 348 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 CSRP3P50461 194 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 HNRNPFP52597 415 aaKnown RBP12.46□□□□□ -0.42
VANGL1-201ENST00000310260 SNRPD1P62314 119 aaKnown RBP12.46□□□□□ -0.42
VANGL1-201ENST00000310260 MPP1Q00013 466 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 STX5Q13190 355 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 CYBRD1Q53TN4 286 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 CARD16Q5EG05 197 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 ARSIQ5FYB1 569 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 EOGTQ5NDL2 527 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 TBCELQ5QJ74 424 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 PERM1Q5SV97 790 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 ZNF773Q6PK81 442 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 SPRED1Q7Z699 444 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 SPATA22Q8NHS9 363 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 PNPT1Q8TCS8 783 aaKnown RBP12.46□□□□□ -0.42
VANGL1-201ENST00000310260 SNX19Q92543 992 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 AGAP2Q99490 1192 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 C9orf16Q9BUW7 83 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 C1QTNF1Q9BXJ1 281 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 KLHL25Q9H0H3 589 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 RAD21L1Q9H4I0 556 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 FANCEQ9HB96 536 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 SCUBE2Q9NQ36 999 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 HACD3Q9P035 362 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 PSME2Q9UL46 239 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 OAZ3Q9UMX2 235 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 ST14Q9Y5Y6 855 aa12.46□□□□□ -0.42
VANGL1-201ENST00000310260 TCRBV21S2A2A0A5A6 115 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 CLDN25C9JDP6 229 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 ACOX3O15254 700 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 MTSS1O43312 755 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 IGSF6O95976 241 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 ALOX5P09917 674 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 JUNBP17275 347 aaPredicted RBP12.45□□□□□ -0.42
VANGL1-201ENST00000310260 TCEA1P23193 301 aaKnown RBP12.45□□□□□ -0.42
VANGL1-201ENST00000310260 CCT8P50990 548 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 SLC7A2P52569 658 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 PRKAA2P54646 552 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 FASTKQ14296 549 aaKnown RBP12.45□□□□□ -0.42
VANGL1-201ENST00000310260 ZNF846Q147U1 533 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.42
VANGL1-201ENST00000310260 MAPRE2Q15555 327 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 PCSK7Q16549 785 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 USP51Q70EK9 711 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 OR2AP1Q8NGE2 309 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 GANCQ8TET4 914 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 SH3YL1Q96HL8 342 aaPredicted RBP12.45□□□□□ -0.42
VANGL1-201ENST00000310260 PSKH2Q96QS6 385 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 SLC39A3Q9BRY0 314 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 MCMBPQ9BTE3 642 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 AKIP1Q9NQ31 210 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 IFT80Q9P2H3 777 aaPredicted RBP12.45□□□□□ -0.42
VANGL1-201ENST00000310260 POU2F3Q9UKI9 436 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 MMP17Q9ULZ9 603 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 PCDHGC4Q9Y5F7 938 aa12.45□□□□□ -0.42
VANGL1-201ENST00000310260 A0A1W2PQF6 199 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms