RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 MATN2O00339 956 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HGSO14964 777 aaPredicted RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CAPN5O15484 640 aaPredicted RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RASSF9O75901 435 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 AHSGP02765 367 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 JMJD7P0C870 316 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CBSLP0DN79 551 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 THRAP10827 490 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ENO3P13929 434 aaPredicted RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ACADLP28330 430 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CSTF2P33240 577 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SHMT2P34897 504 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CBSP35520 551 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CCNFP41002 786 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ABCG1P45844 678 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CLCN7P51798 805 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLC12A2P55011 1212 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GABREP78334 506 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ABRQ12979 859 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PRKG2Q13237 762 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 NAB1Q13506 487 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLMAPQ14BN4 828 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 KLHL38Q2WGJ6 581 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RBM20Q5T481 1227 aaKnown RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZNF549Q6P9A3 640 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAB11FIP2Q7L804 512 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLITRK4Q8IW52 837 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FBXO39Q8N4B4 442 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OR4E2Q8NGC2 313 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 WDR36Q8NI36 951 aaKnown RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CD200R1Q8TD46 325 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 INPP5DQ92835 1189 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ELMO2Q96JJ3 720 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TGM7Q96PF1 710 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CPNE1Q99829 537 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAB11FIP5Q9BXF6 653 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SEMA6CQ9H3T2 930 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LRRC4CQ9HCJ2 640 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LATS2Q9NRM7 1088 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TMEM9Q9P0T7 183 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLC39A10Q9ULF5 831 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SATB2Q9UPW6 733 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CDYLQ9Y232 598 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 DHRS7Q9Y394 339 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LOXL2Q9Y4K0 774 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FAM95CA0A1B0GW59 222 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OR6C74A6NCV1 312 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OR5K3A6NET4 321 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 A8MU76 341 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 AGRPO00253 132 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 EIF3FO00303 357 aaPredicted RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SLU7O95391 586 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CATP04040 527 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MPOP05164 745 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MPC1LP0DKB6 136 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SAT1P21673 171 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MPSTP25325 297 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MAP4P27816 1152 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RBMS1P29558 406 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GP5P40197 560 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 SKIV2L2P42285 1042 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 BDKRB1P46663 353 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GFERP55789 205 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GPX6P59796 221 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TUBB4BP68371 445 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZFP36L1Q07352 338 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ACSBG2Q5FVE4 666 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HECTD2Q5U5R9 776 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 UNQ6494/PRO21346Q6UXR6 183 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FAM92BQ6ZTR7 304 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 NEK10Q6ZWH5 1172 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CYS1Q717R9 158 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TMPRSS9Q7Z410 1059 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 ZC3HC1Q86WB0 502 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 AMIGO1Q86WK6 493 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FAM129CQ86XR2 697 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CPNE9Q8IYJ1 553 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LSMEM2Q8N112 164 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MYO1HQ8N1T3 1032 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 LRRN4CLQ8ND94 238 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 AGBL5Q8NDL9 886 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RCBTB1Q8NDN9 531 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GIMAP7Q8NHV1 300 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FBF1Q8TES7 1133 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 VPS39Q96JC1 886 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CD180Q99467 661 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RAB33BQ9H082 229 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CDC42EP4Q9H3Q1 356 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 RHOJQ9H4E5 214 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TFB2MQ9H5Q4 396 aaKnown RBP10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 POLR1BQ9H9Y6 1135 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 HRASLS2Q9NWW9 162 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 OGFRQ9NZT2 677 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 EPHA6Q9UF33 1036 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 NFU1Q9UMS0 254 aa10.69□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 CACNA1AO00555 2505 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TRABD2BA6NFA1 517 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TLCD2A6NGC4 264 aa10.68□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 FAM159BA6NKW6 160 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms