RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 APOA4P06727 396 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 CCNYL3P0C7X3 344 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 ITGB6P18564 788 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 PRDX3P30048 256 aaKnown RBP25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 CCR7P32248 378 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 TERF1P54274 439 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 COL9A2Q14055 689 aaPredicted RBP25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 LY6DQ14210 128 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 MRNIPQ6NTE8 343 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 LDB1Q86U70 411 aaPredicted RBP25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 LRRC6Q86X45 466 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 UNC5BQ8IZJ1 945 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 OR5K2Q8NHB8 316 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 COG1Q8WTW3 980 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 EXTL1Q92935 676 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 MED8Q96G25 268 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 GNPTGQ9UJJ9 305 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 KALRNO60229 2985 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 PIKFYVEQ9Y2I7 2098 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 PFDN6O15212 129 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 NDUFS3O75489 264 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 VAPBO95292 243 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 FNTAP49354 379 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 HSPA14Q0VDF9 509 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 TMED2Q15363 201 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 KCTD19Q17RG1 926 aaPredicted RBP25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 LINC00303Q3SY05 128 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 DNAJC21Q5F1R6 531 aaKnown RBP25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 PTRHD1Q6GMV3 140 aaKnown RBP25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 PWWP2BQ6NUJ5 590 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 SDCCAG8Q86SQ7 713 aaPredicted RBP25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 SLC22A15Q8IZD6 547 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 OTUD6BQ8N6M0 293 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 MFSD3Q96ES6 412 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 PANX3Q96QZ0 392 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 XKR8Q9H6D3 395 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 FANCEQ9HB96 536 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 SAMD15Q9P1V8 674 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 ICKQ9UPZ9 632 aa25.65■■□□□ 1.7
CDKN2A-201ENST00000304494 SLC9B1P1A6NJY1 282 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 PHF2O75151 1096 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 MLNP12872 115 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 PAMP19021 973 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 MC1RQ01726 317 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 TBR1Q16650 682 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 CASC4Q6P4E1 433 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 ADGRF3Q8IZF5 1079 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 ZNF843Q8N446 348 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 CPT1BQ92523 772 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 PPM1MQ96MI6 270 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 CATSPER2Q96P56 530 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 PITPNM3Q9BZ71 974 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 P2RY12Q9H244 342 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 SYTL2Q9HCH5 934 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 XAB2Q9HCS7 855 aaKnown RBP25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 ACTR10Q9NZ32 417 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 PADI1Q9ULC6 663 aa25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 TDRKHQ9Y2W6 561 aaKnown RBP25.64■■□□□ 1.7
CDKN2A-201ENST00000304494 MAGEB16A2A368 324 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 PIPSLA2A3N6 862 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 IQCF5A8MTL0 148 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 KPNA5O15131 536 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 AVILO75366 819 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 GPC4O75487 556 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 RPN2P04844 631 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 RPS3P23396 243 aaKnown RBP eCLIP25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 DLSTP36957 453 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 CSE1LP55060 971 aaKnown RBP25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 RNF187Q5TA31 235 aaPredicted RBP25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 ANKRD22Q5VYY1 191 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 FBXO38Q6PIJ6 1188 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 CES3Q6UWW8 571 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 HOOK3Q86VS8 718 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 MCUQ8NE86 351 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 ZNF501Q96CX3 271 aaPredicted RBP25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 KCND1Q9NSA2 647 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 OR6C2Q9NZP2 312 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 CDYLQ9Y232 598 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 NEU2Q9Y3R4 380 aa25.63■■□□□ 1.69
CDKN2A-201ENST00000304494 TMEM63AO94886 807 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 TIAF1O95411 115 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 ARNTP27540 789 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 AOAHP28039 575 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 GPR19Q15760 415 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 KIAA0930Q6ICG6 404 aaPredicted RBP25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 BORAQ6PGQ7 559 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 UNC5AQ6ZN44 842 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 CAND1Q86VP6 1230 aaKnown RBP25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 KRT222Q8N1A0 295 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 GSDMBQ8TAX9 411 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 LKAAEAR1Q8TD35 194 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 STARD8Q92502 1023 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 RNF31Q96EP0 1072 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 TCF12Q99081 682 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 LATS2Q9NRM7 1088 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 IL17BQ9UHF5 180 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 KCND3Q9UK17 655 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 CROTQ9UKG9 612 aa25.62■■□□□ 1.69
CDKN2A-201ENST00000304494 SDR42E2A6NKP2 422 aa25.61■■□□□ 1.69
CDKN2A-201ENST00000304494 CPNE3O75131 537 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms