RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF839A8K0R7 811 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 GRM6O15303 877 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 AKAP10O43572 662 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 IDO1P14902 403 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 PORP16435 677 aaPredicted RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 SYN1P17600 705 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 CD9P21926 228 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 CCR7P32248 378 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 GGT5P36269 586 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 GRIA3P42263 894 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 MAPK8P45983 427 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 RGS4P49798 205 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 MAP7D1Q3KQU3 841 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 XKR7Q5GH72 579 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 USP45Q70EL2 814 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 BEND7Q8N7W2 519 aaPredicted RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 PCYOX1LQ8NBM8 494 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 OR2A12Q8NGT7 310 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 FAM126AQ9BYI3 521 aaPredicted RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 WWOXQ9NZC7 414 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 SLC8A2Q9UPR5 921 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 TRANK1O15050 2925 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 RAD51BO15315 384 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 C1SP09871 688 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 CSNK1DP48730 415 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 ATP4BP51164 291 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 MESP2Q0VG99 397 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 RFTN2Q52LD8 501 aaPredicted RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 OGFOD2Q6N063 350 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 TTC33Q6PID6 262 aaPredicted RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 MILR1Q7Z6M3 343 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 SLC15A3Q8IY34 581 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 LRRC3BQ96PB8 259 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 ZNF382Q96SR6 550 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 SPHK2Q9NRA0 654 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 DUS2Q9NX74 493 aaKnown RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 CMTM6Q9NX76 183 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 SELENONQ9NZV5 590 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 CNOT6Q9ULM6 557 aaKnown RBP21.49■■□□□ 1.03
TPM4-201ENST00000300933 MAFFQ9ULX9 164 aa21.49■■□□□ 1.03
TPM4-201ENST00000300933 DGKAP23743 735 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 ZFP36L2P47974 494 aaKnown RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 HMGCS1Q01581 520 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 NR6A1Q15406 480 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 C8orf82Q6P1X6 216 aaPredicted RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 VRK3Q8IV63 474 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 SLC52A3Q9NQ40 469 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 TBC1D23Q9NUY8 699 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 AIG1Q9NVV5 245 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 SUCOQ9UBS9 1254 aaKnown RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 ANGPTL3Q9Y5C1 460 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 SPTBN5Q9NRC6 3674 aaKnown RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 CLIC3O95833 236 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 C8BP07358 591 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 PTPN2P17706 415 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 ATP6V1B2P21281 511 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 TUBA4AP68366 448 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 BOP1Q14137 746 aaKnown RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 ARSIQ5FYB1 569 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 SPPL2CQ8IUH8 684 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 SPPL3Q8TCT6 385 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 PYCR2Q96C36 320 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 LRRC58Q96CX6 371 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 ECHDC3Q96DC8 303 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 PDLIM5Q96HC4 596 aaKnown RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 COPS8Q99627 209 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 ANKRD60Q9BZ19 345 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 ARMC7Q9H6L4 198 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 WBP1LQ9NX94 342 aa21.48■■□□□ 1.03
TPM4-201ENST00000300933 PTBP2Q9UKA9 531 aaKnown RBP21.48■■□□□ 1.03
TPM4-201ENST00000300933 SLC22A3O75751 556 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 BMP10O95393 424 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 POP4O95707 220 aaKnown RBP21.47■■□□□ 1.03
TPM4-201ENST00000300933 PRR35P0CG20 571 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 G6PDP11413 515 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 RPS3P23396 243 aaKnown RBP eCLIP21.47■■□□□ 1.03
TPM4-201ENST00000300933 SLC6A2P23975 617 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 BMPR1AP36894 532 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 MAPK10P53779 464 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 ATP6AP1LQ52LC2 224 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 NHSL2Q5HYW2 709 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 SAMD4BQ5PRF9 694 aaKnown RBP21.47■■□□□ 1.03
TPM4-201ENST00000300933 GPR107Q5VW38 600 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 Q6ZVL8 140 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 NCCRP1Q6ZVX7 275 aaPredicted RBP21.47■■□□□ 1.03
TPM4-201ENST00000300933 C12orf76Q8N812 135 aaPredicted RBP21.47■■□□□ 1.03
TPM4-201ENST00000300933 HTATIP2Q9BUP3 242 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 SCN8AQ9UQD0 1980 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 A0A1W2PPW3 197 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 FAM149AA5PLN7 773 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 TPST1O60507 370 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 LEFTY1O75610 366 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 RSL1D1O76021 490 aaKnown RBP21.47■■□□□ 1.03
TPM4-201ENST00000300933 AKT1P31749 480 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 DGKQP52824 942 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 TRAF3Q13114 568 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 ATP1A4Q13733 1029 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 NFYCQ13952 458 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 CAMK1Q14012 370 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 HM13Q8TCT9 377 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms