RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CBX2Q14781 532 aaPredicted RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CRY2Q49AN0 593 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 SLC43A3Q8NBI5 491 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 IGFLR1Q9H665 355 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CACNG4Q9UBN1 327 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 MRPS23Q9Y3D9 190 aaKnown RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 URADA6NGE7 173 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 NEDD8-MDP1E9PL57 170 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 INSIG1O15503 277 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CHST10O43529 356 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF24P17028 368 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 FUT4P22083 530 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CASP9P55211 416 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 BRSK1Q8TDC3 778 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 SEC14L1Q92503 715 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 HEPHQ9BQS7 1158 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 TTPALQ9BTX7 342 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 NUSAP1Q9BXS6 441 aaKnown RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 RABL2AQ9UBK7 228 aaPredicted RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ZDHHC2Q9UIJ5 367 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 IKZF2Q9UKS7 526 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 PPIEQ9UNP9 301 aaKnown RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CFL2Q9Y281 166 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 COL1A2P08123 1366 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 AURKAO14965 403 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ARPC2O15144 300 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 FFAR2O15552 330 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 SLC25A12O75746 678 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 BCAS2O75934 225 aaPredicted RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 MPP2Q14168 576 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 TOMM20Q15388 145 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 SOWAHAQ2M3V2 549 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 KLHL24Q6TFL4 600 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 TMEM192Q8IY95 271 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 OR5K1Q8NHB7 308 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF384Q8TF68 577 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 TIFAQ96CG3 184 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 AIF1LQ9BQI0 150 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 AKTIPQ9H8T0 292 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ABCG2Q9UNQ0 655 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 TPRG1LQ5T0D9 272 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 SYPL2Q5VXT5 272 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 PDE12Q6L8Q7 609 aaKnown RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 ZNF773Q6PK81 442 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 MYOM1P52179 1685 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM234BA2RU67 622 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM159BA6NKW6 160 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 GNB5O14775 395 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 ATG13O75143 517 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 GSTT2P0CG29 244 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 GSTT2BP0CG30 244 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 RGS8P57771 180 aaPredicted RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 E2F2Q14209 437 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 MPPE1Q53F39 396 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 TREML1Q86YW5 311 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 SLC9A6Q92581 669 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 LRRC58Q96CX6 371 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 MKLN1Q9UL63 735 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 ZFP37Q9Y6Q3 630 aaPredicted RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 IGKV6D-41A0A0C4DH26 115 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 PRPS2P11908 318 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 IMPDH1P20839 514 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 PIGKQ92643 395 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 PIGUQ9H490 435 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 CCSER2Q9H7U1 834 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 AKAP7Q9P0M2 348 aaPredicted RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 FABP12A6NFH5 140 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 C9IYK1 514 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 HCN1O60741 890 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 ITGA3P26006 1051 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 GJA9P57773 515 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 CRTC2Q53ET0 693 aaPredicted RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 SLC38A4Q969I6 547 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 SNX27Q96L92 541 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 TRIT1Q9H3H1 467 aaKnown RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 FCF1Q9Y324 198 aaKnown RBP16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
SH3RF1-201ENST00000284637 NME6O75414 186 aaPredicted RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HERVK_113P63132 956 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 CD83Q01151 205 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 MVKQ03426 396 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HSPB3Q12988 150 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 KCNJ11Q14654 390 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 TAF8Q7Z7C8 310 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 OR9I1Q8NGQ6 314 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 OR13C4Q8NGS5 318 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ERMAPQ96PL5 475 aaPredicted RBP16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 MIPEPQ99797 713 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ERVK-6Q9BXR3 956 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 PRAMEF33A0A0G2JMD5 474 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 FAM189A1O60320 539 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 DLX3O60479 287 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 PRAMEF10O60809 474 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 C22orf31O95567 290 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 LAMP2P13473 410 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 HTR7P34969 479 aa16.18■□□□□ 0.18
SH3RF1-201ENST00000284637 ERVK-8P63133 956 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms