RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 MCOLN3Q8TDD5 553 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 CDK15Q96Q40 435 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 MYADMQ96S97 322 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 NPAS2Q99743 824 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 SH3GL3Q99963 347 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 HDAC8Q9BY41 377 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 ZCCHC2Q9C0B9 1178 aaKnown RBP14.99□□□□□ -0.01
SF3B4-201ENST00000271628 SLC32A1Q9H598 525 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 MRPL40Q9NQ50 206 aaKnown RBP14.99□□□□□ -0.01
SF3B4-201ENST00000271628 SDR39U1Q9NRG7 319 aaPredicted RBP14.99□□□□□ -0.01
SF3B4-201ENST00000271628 ITM2BQ9Y287 266 aa14.99□□□□□ -0.01
SF3B4-201ENST00000271628 OR2AG2A6NM03 316 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 NRP2O60462 931 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 SLCO2B1O94956 709 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 APODP05090 189 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 HMOX2P30519 316 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 ERVK-8P63133 956 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 DPTQ07507 201 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 TRAF3Q13114 568 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 ITPRIPL2Q3MIP1 535 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 TMEM52BQ4KMG9 183 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 RNF165Q6ZSG1 346 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 MMAAQ8IVH4 418 aaKnown RBP14.98□□□□□ -0.01
SF3B4-201ENST00000271628 PCYOX1LQ8NBM8 494 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 TSPEARQ8WU66 669 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 RIPOR3Q96MK2 946 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 CDRT15Q96T59 188 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 ACOX2Q99424 681 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 TRMT61BQ9BVS5 477 aaKnown RBP14.98□□□□□ -0.01
SF3B4-201ENST00000271628 TMEM45AQ9NWC5 275 aa14.98□□□□□ -0.01
SF3B4-201ENST00000271628 TCF20Q9UGU0 1960 aaKnown RBP14.98□□□□□ -0.01
SF3B4-201ENST00000271628 NPC1O15118 1278 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 SPINT1O43278 529 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 AP1G1O43747 822 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 LZTS3O60299 673 aaPredicted RBP14.97□□□□□ -0.01
SF3B4-201ENST00000271628 RECQL5O94762 991 aaPredicted RBP14.97□□□□□ -0.01
SF3B4-201ENST00000271628 GDI1P31150 447 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 GDF5P43026 501 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 PRLHRP49683 370 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 METAP1P53582 386 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 LRP8Q14114 963 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 ZNF423Q2M1K9 1284 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 ATP6AP1LQ52LC2 224 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 PAOXQ6QHF9 649 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 IL27RAQ6UWB1 636 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 HACD2Q6Y1H2 254 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 SFTPA1Q8IWL2 248 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 EFCAB3Q8N7B9 438 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 RASGEF1AQ8N9B8 481 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 CATSPER1Q8NEC5 780 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 TMEM159Q96B96 161 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 NUS1Q96E22 293 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 CCM2Q9BSQ5 444 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 PRSS16Q9NQE7 514 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 CACNA2D2Q9NY47 1150 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 DOCK8Q8NF50 2099 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 CFLARO15519 480 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 C6P13671 934 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 FLOT2Q14254 428 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 GRAMD1BQ3KR37 738 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 SYTL3Q4VX76 610 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 LIN52Q52LA3 116 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 CWF19L1Q69YN2 538 aaKnown RBP14.97□□□□□ -0.01
SF3B4-201ENST00000271628 REP15Q6BDI9 236 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 PARM1Q6UWI2 310 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 LRRC70Q7Z2Q7 622 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 VRK3Q8IV63 474 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 FUNDC1Q8IVP5 155 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 DCBLD1Q8N8Z6 715 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 FGF14Q92915 247 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 ROPN1LQ96C74 230 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 KXD1Q9BQD3 176 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 TRPS1Q9UHF7 1281 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 NDUFAF1Q9Y375 327 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 DTNAQ9Y4J8 743 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 GPR45Q9Y5Y3 372 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 COL4A3Q01955 1670 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 DENND4AQ7Z401 1863 aa14.97□□□□□ -0.01
SF3B4-201ENST00000271628 WDR47O94967 919 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 ME2P23368 584 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 GPR1P46091 355 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 CLCN2P51788 898 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 C6orf136Q5SQH8 315 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 FAM219BQ5XKK7 198 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 TMEM220Q6QAJ8 160 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 Q6ZSR9 355 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 BEND7Q8N7W2 519 aaPredicted RBP14.96□□□□□ -0.01
SF3B4-201ENST00000271628 OR9I1Q8NGQ6 314 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 CXorf40AQ8TE69 158 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 GLMNQ92990 594 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 BRINP2Q9C0B6 783 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 Q9H521 79 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 AIG1Q9NVV5 245 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 CLEC1BQ9P126 229 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 GIMAP2Q9UG22 337 aa14.96□□□□□ -0.01
SF3B4-201ENST00000271628 FBP2O00757 339 aa14.96□□□□□ -0.02
SF3B4-201ENST00000271628 MRASO14807 208 aa14.96□□□□□ -0.02
SF3B4-201ENST00000271628 INPP4BO15327 924 aa14.96□□□□□ -0.02
SF3B4-201ENST00000271628 DENRO43583 198 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms