RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ELFN1P0C7U0 828 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 CYP2A6P11509 494 aaPredicted RBP13.29□□□□□ -0.28
VMP1-201ENST00000262291 ZNF24P17028 368 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 HMOX2P30519 316 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 RPIAP49247 311 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 NR6A1Q15406 480 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 GAB4Q2WGN9 574 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 MFSD4BQ5TF39 518 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
VMP1-201ENST00000262291 PDPRQ8NCN5 879 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 GAB3Q8WWW8 586 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 STON2Q8WXE9 905 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 DGCR14Q96DF8 476 aaKnown RBP13.29□□□□□ -0.28
VMP1-201ENST00000262291 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 PIF1Q9H611 641 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 GPR45Q9Y5Y3 372 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 MSH3P20585 1137 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 ITPKAP23677 461 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 AOAHP28039 575 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 IL12AP29459 219 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 GGT5P36269 586 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 EMP3P54852 163 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 PDK3Q15120 406 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 PCBP2Q15366 365 aaKnown RBP eCLIP13.29□□□□□ -0.284e-9■□□□□ 10.9
VMP1-201ENST00000262291 MAPRE2Q15555 327 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 TTLL9Q3SXZ7 439 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 C6orf136Q5SQH8 315 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 FBXL19Q6PCT2 694 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 OTUB2Q96DC9 234 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 CD244Q9BZW8 370 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 FBXO10Q9UK96 956 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 CROTQ9UKG9 612 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 TPD52L2O43399 206 aaKnown RBP13.28□□□□□ -0.28
VMP1-201ENST00000262291 SGTAO43765 313 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 FKBP6O75344 327 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 TRIP10Q15642 601 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 CPSF6Q16630 551 aaKnown RBP eCLIP13.28□□□□□ -0.28
VMP1-201ENST00000262291 TIGD2Q4W5G0 525 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 XKR7Q5GH72 579 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 KLHL35Q6PF15 583 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 DHDDSQ86SQ9 333 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 PDSS2Q86YH6 399 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 RNF175Q8N4F7 328 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 METTL25Q8N6Q8 603 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 FAM110BQ8TC76 370 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 SMARCD2Q92925 531 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 ARRDC3Q96B67 414 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 P2RY13Q9BPV8 354 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 KLHL4Q9C0H6 718 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 DEC1Q9P2X7 70 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 POLR3HQ9Y535 204 aaPredicted RBP13.28□□□□□ -0.28
VMP1-201ENST00000262291 SMIM31A0A1B0GVY4 71 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 ANGPT2O15123 496 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 TSPAN6O43657 245 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 CCR3P51677 355 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 NEK2P51955 445 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 ERVK-21P61565 698 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 NADK2Q4G0N4 442 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 RFTN2Q52LD8 501 aaPredicted RBP13.28□□□□□ -0.28
VMP1-201ENST00000262291 LIPIQ6XZB0 460 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 KBTBD6Q86V97 674 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 ETFBKMTQ8IXQ9 262 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 AP2M1Q96CW1 435 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 KXD1Q9BQD3 176 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 SLC2A11Q9BYW1 496 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 PLA2G2FQ9BZM2 168 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 COPS7BQ9H9Q2 264 aaPredicted RBP13.28□□□□□ -0.28
VMP1-201ENST00000262291 HPS4Q9NQG7 708 aa13.28□□□□□ -0.28
VMP1-201ENST00000262291 SDR39U1Q9NRG7 319 aaPredicted RBP13.28□□□□□ -0.28
VMP1-201ENST00000262291 C15orf38-AP3S2A0A0A6YYH1 394 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 MMP20O60882 483 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 ZNF234Q14588 700 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 DUSP6Q16828 381 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 CCSMST1Q4G0I0 132 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 ATP6AP1LQ52LC2 224 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 PAGE3Q5JUK9 113 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 ARPINQ7Z6K5 226 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 IFNEQ86WN2 208 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 MMAAQ8IVH4 418 aaKnown RBP13.27□□□□□ -0.28
VMP1-201ENST00000262291 CLHC1Q8NHS4 586 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 DNAJB14Q8TBM8 379 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 AIG1Q9NVV5 245 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 EGFL7Q9UHF1 273 aa13.27□□□□□ -0.28
VMP1-201ENST00000262291 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.28
VMP1-201ENST00000262291 IGLV3-16A0A075B6K0 115 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 ASPDHA6ND91 283 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 SPINT1O43278 529 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 RSL1D1O76021 490 aaKnown RBP13.27□□□□□ -0.29
VMP1-201ENST00000262291 OTCP00480 354 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 SMIM18P0DKX4 95 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 G6PDP11413 515 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 SLC2A4P14672 509 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 UQCRBP14927 111 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms