RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SYNRGQ9UMZ2 1314 aa4.17□□□□□ -1.74
CCDC54-201ENST00000261058 A0A0B4J293 547 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 MED19A0JLT2 244 aaPredicted RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 C16orf97H3BN30 126 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 CAPN9O14815 690 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 BUB3O43684 328 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 TADA2AO75478 443 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SLCO2B1O94956 709 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 AMD1P17707 334 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 ZNF41P51814 821 aaPredicted RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 PRKCZQ05513 592 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 RALGDSQ12967 914 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 HSPB3Q12988 150 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 PLA2G7Q13093 441 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SMC1AQ14683 1233 aaKnown RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 VWC2Q2TAL6 325 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 LETM2Q2VYF4 491 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 ACCSLQ4AC99 568 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 ARMC4Q5T2S8 1044 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 TMPRSS11FQ6ZWK6 438 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 LCA5Q86VQ0 697 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 IQCHQ86VS3 1027 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SNX32Q86XE0 403 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 NBPF5PQ86XG9 351 aaPredicted RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 CRYBG2Q8N1P7 616 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 METTL27Q8N6F8 245 aaPredicted RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 PI4KAP1Q8N8J0 262 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 ZFAND2BQ8WV99 257 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 CD101Q93033 1021 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SLAMF9Q96A28 289 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 NXNL1Q96CM4 212 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SPDL1Q96EA4 605 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 VMP1Q96GC9 406 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 ZMAT2Q96NC0 199 aaKnown RBP4.16□□□□□ -1.74
CCDC54-201ENST00000261058 TSPY26PQ9H489 355 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 TCF7L2Q9NQB0 619 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 PRDM4Q9UKN5 801 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 TMCC3Q9ULS5 477 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 LRP12Q9Y561 859 aa4.16□□□□□ -1.74
CCDC54-201ENST00000261058 SMCHD1A6NHR9 2005 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 TRIM77I1YAP6 450 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 BMPR1BO00238 502 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 GGPS1O95749 300 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 KRT19P08727 400 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 RAB40ALP0C0E4 278 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 ACP2P11117 423 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 CETPP11597 493 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 PAX1P15863 534 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 DCTP40126 519 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 MTHFRP42898 656 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 MATR3P43243 847 aaKnown RBP eCLIP4.15□□□□□ -1.74
CCDC54-201ENST00000261058 FMO5P49326 533 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 RAB28P51157 221 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 RPL36AP83881 106 aaKnown RBP4.15□□□□□ -1.74
CCDC54-201ENST00000261058 ZNF718Q3SXZ3 478 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 MDH1BQ5I0G3 518 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 KRBOX4Q5JUW0 171 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 CCDC158Q5M9N0 1113 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 TAF3Q5VWG9 929 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 PRR27Q6MZM9 219 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 PLBD1Q6P4A8 553 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 CHST3Q7LGC8 479 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 CCDC186Q7Z3E2 898 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 CENPVQ7Z7K6 275 aaPredicted RBP4.15□□□□□ -1.74
CCDC54-201ENST00000261058 RPAINQ86UA6 219 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 MAB21L3Q8N8X9 362 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 ZBTB8BQ8NAP8 495 aaPredicted RBP4.15□□□□□ -1.74
CCDC54-201ENST00000261058 SLC24A4Q8NFF2 622 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 OR5M8Q8NGP6 311 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 RNF128Q8TEB7 428 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 ZNF473Q8WTR7 871 aaKnown RBP4.15□□□□□ -1.74
CCDC54-201ENST00000261058 VPS33AQ96AX1 596 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 ZNF653Q96CK0 615 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 HDAC11Q96DB2 347 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 SLC25A23Q9BV35 468 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 FNDC11Q9BVV2 318 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 TBC1D17Q9HA65 648 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 ZFP57Q9NU63 452 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 DONSONQ9NYP3 566 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 TUBE1Q9UJT0 475 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.15□□□□□ -1.74
CCDC54-201ENST00000261058 SNX5Q9Y5X3 404 aa4.15□□□□□ -1.74
CCDC54-201ENST00000261058 CENPJQ9HC77 1338 aaPredicted RBP4.15□□□□□ -1.75
CCDC54-201ENST00000261058 WDR81Q562E7 1941 aa4.15□□□□□ -1.75
CCDC54-201ENST00000261058 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 C19orf81C9J6K1 198 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 CCDC188H7C350 402 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 IPO8O15397 1037 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 RNASEH1O60930 286 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 RECQL5O94762 991 aaPredicted RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 CELF2O95319 508 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 IGHDP01880 384 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 CCDC175P0C221 793 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 CKMT2P17540 419 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ITGB6P18564 788 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 SLC6A6P31641 620 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 PSMC4P43686 418 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 SLC9A3P48764 834 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms