RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SCN2BO60939 215 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 KRT34O76011 436 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 S1PR4O95977 384 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 APOA1P02647 267 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 LAMP2P13473 410 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 ADRB3P13945 408 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 LRRC74BQ6ZQY2 392 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 LINC00471Q8N535 108 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 OR10T2Q8NGX3 314 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 PCDH19Q8TAB3 1148 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 THOC1Q96FV9 657 aaKnown RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 KCNF1Q9H3M0 494 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 HEY2Q9UBP5 337 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 HS3ST3A1Q9Y663 406 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 BUD23O43709 281 aaKnown RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 HSD3B1P14060 373 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 CHRNB2P17787 502 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 HSD3B2P26439 372 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 CD38P28907 300 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 C2orf80Q0P641 193 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 MTAPQ13126 283 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 COMMD2Q86X83 199 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 FBXO15Q8NCQ5 510 aaPredicted RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 MOCS1Q9NZB8 636 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 HYKKA2RU49 373 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 DCXO43602 365 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 AK1P00568 194 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 HLA-DQB2P05538 268 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 ANXA4P09525 319 aaPredicted RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 ICAM2P13598 275 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 TRMT5Q32P41 509 aaKnown RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 RNF43Q68DV7 783 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 CAND1Q86VP6 1230 aaKnown RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 ITFG1Q8TB96 612 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 MYRFLQ96LU7 910 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 MAGEL2Q9UJ55 1249 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 FFAR2O15552 330 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 LDLRP01130 860 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 GIMD1P0DJR0 217 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 TFE3P19532 575 aaPredicted RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 CPSF6Q16630 551 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 DPPA4Q7L190 304 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 LONP2Q86WA8 852 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC44A1Q8WWI5 657 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.17□□□□□ -0.32e-8■■■□□ 17
PRPF38A-201ENST00000257181 IPPKQ9H8X2 491 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 NXT1Q9UKK6 140 aaKnown RBP13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
PRPF38A-201ENST00000257181 CAPN8A6NHC0 703 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 IL6P05231 212 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 MYCLP1P12525 358 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 RPL4P36578 427 aaKnown RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CRELD2Q6UXH1 353 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 BPHLQ86WA6 291 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TBC1D21Q8IYX1 336 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 NXPE1Q8N323 547 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CDYL2Q8N8U2 506 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 NDNQ99608 321 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TBL1XR1Q9BZK7 514 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 RFPL2O75678 378 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 JAZF1Q86VZ6 243 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 Q8N9G6 341 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 KLK6Q92876 244 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CDKN2AIPNLQ96HQ2 116 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 C9orf16Q9BUW7 83 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 A0A0J9YYE9 177 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 GJE1A6NN92 205 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 PPEF2O14830 753 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 BRINP1O60477 761 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 SLC22A3O75751 556 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TSPAN8P19075 237 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 SOX6P35712 828 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 FOLR3P41439 243 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 FCHO2Q0JRZ9 810 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 TRIP10Q15642 601 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 CHRNA6Q15825 494 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 SGCBQ16585 318 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 GTF2IRD2BQ6EKJ0 949 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 GTF2IRD2Q86UP8 949 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 PLD3Q8IV08 490 aa13.16□□□□□ -0.3
PRPF38A-201ENST00000257181 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms