RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ERVPABLB-1P60509 514 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 TRMT5Q32P41 509 aaKnown RBP18.48■□□□□ 0.55
TRIM47-201ENST00000254816 TCHHL1Q5QJ38 904 aaPredicted RBP18.48■□□□□ 0.55
TRIM47-201ENST00000254816 SCIMPQ6UWF3 145 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 FAM124AQ86V42 546 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 ZNF547Q8IVP9 402 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 ANKRD27Q96NW4 1050 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 CD244Q9BZW8 370 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 CIDEBQ9UHD4 219 aa18.48■□□□□ 0.55
TRIM47-201ENST00000254816 SLC5A10A0PJK1 596 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ANXA5P08758 320 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 LINC00032P0C843 101 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ZXDCQ2QGD7 858 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-201ENST00000254816 C6orf163Q5TEZ5 329 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 LETMD1Q6P1Q0 360 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 TMEM92Q6UXU6 159 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 GPRIN3Q6ZVF9 776 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 CFAP206Q8IYR0 622 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 EFCAB3Q8N7B9 438 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 CDYL2Q8N8U2 506 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ZCCHC2Q9C0B9 1178 aaKnown RBP18.47■□□□□ 0.55
TRIM47-201ENST00000254816 IPPKQ9H8X2 491 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 GFYI3L273 518 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 MAT2AP31153 395 aaKnown RBP18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ACTR3P61158 418 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 CUL3Q13618 768 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 GTF2H3Q13889 308 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 INPP5AQ14642 412 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ACTRT2Q8TDY3 377 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ATP6V1E2Q96A05 226 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 COX14Q96I36 57 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 ZNF385DQ9H6B1 395 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 OPTCQ9UBM4 332 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 NDRG2Q9UN36 371 aaKnown RBP18.47■□□□□ 0.55
TRIM47-201ENST00000254816 OR1A2Q9Y585 309 aa18.47■□□□□ 0.55
TRIM47-201ENST00000254816 A0A1W2PQU0 124 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 GIPC1O14908 333 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 PLRG1O43660 514 aaKnown RBP18.46■□□□□ 0.55
TRIM47-201ENST00000254816 HIST1H2AGP0C0S8 130 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-201ENST00000254816 HIST1H2ADP20671 130 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 ADPRHP54922 357 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 NAA20P61599 178 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 MRPS21P82921 87 aaKnown RBP18.46■□□□□ 0.55
TRIM47-201ENST00000254816 CDK3Q00526 305 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 IRF4Q15306 451 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 BCL7AQ4VC05 210 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 ADAMTSL4Q6UY14 1074 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 TRMT11Q7Z4G4 463 aaKnown RBP18.46■□□□□ 0.55
TRIM47-201ENST00000254816 OR4F6Q8NGB9 312 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 STON2Q8WXE9 905 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 FAM3CQ92520 227 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 HIST1H2AHQ96KK5 128 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 ZNF382Q96SR6 550 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 HIST1H2AJQ99878 128 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 H2AFJQ9BTM1 129 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 EPHX3Q9H6B9 360 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 ANGPTL3Q9Y5C1 460 aa18.46■□□□□ 0.55
TRIM47-201ENST00000254816 COPG1Q9Y678 874 aaKnown RBP18.46■□□□□ 0.55
TRIM47-201ENST00000254816 MATN4O95460 622 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 GCKP35557 465 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 CCSMST1Q4G0I0 132 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 ZNF658BQ4V348 819 aaPredicted RBP18.46■□□□□ 0.54
TRIM47-201ENST00000254816 NEK10Q6ZWH5 1172 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 LARP4Q71RC2 724 aaKnown RBP eCLIP18.46■□□□□ 0.543e-9■□□□□ 8.9
TRIM47-201ENST00000254816 MYLK4Q86YV6 388 aaPredicted RBP18.46■□□□□ 0.54
TRIM47-201ENST00000254816 PYCR2Q96C36 320 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 CCDC124Q96CT7 223 aaKnown RBP18.46■□□□□ 0.54
TRIM47-201ENST00000254816 CMTM5Q96DZ9 223 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 TRIM54Q9BYV2 358 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 AKTIPQ9H8T0 292 aa18.46■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3DA0A087WVF3 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3IA0A087WXS9 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3EA0A087X179 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3KA0A087X1G2 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3FA6NER0 549 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3LB9A6J9 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 RNGTTO60942 597 aaKnown RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 POP7O75817 140 aaKnown RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 ENO2P09104 434 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3HP0C7X1 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 UROSP10746 265 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 COX4I1P13073 169 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 ITGAXP20702 1163 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 CYP2A7P20853 494 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 PIK3R1P27986 724 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 BDKRB1P46663 353 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 SLC44A4Q53GD3 710 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TMEM31Q5JXX7 168 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3GQ6DHY5 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3CQ6IPX1 549 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 XKR5Q6UX68 686 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 TBC1D3Q8IZP1 549 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 SNX31Q8N9S9 440 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 UBTD2Q8WUN7 234 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 GLMNQ92990 594 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 CDX2Q99626 313 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-201ENST00000254816 MYOCQ99972 504 aa18.45■□□□□ 0.54
TRIM47-201ENST00000254816 FZD3Q9NPG1 666 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms