RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 RORAP35398 523 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 CCL11P51671 97 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ABRQ12979 859 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 IL10RAQ13651 578 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ADGRF3Q8IZF5 1079 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ENDOVQ8N8Q3 282 aaKnown RBP20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
NEDD8-201ENST00000250495 HGH1Q9BTY7 390 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ING2Q9H160 280 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 XKR8Q9H6D3 395 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 PCMTD2Q9NV79 361 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ACTR10Q9NZ32 417 aa20.41■□□□□ 0.86
NEDD8-201ENST00000250495 PCDHGA9Q9Y5G4 932 aaKnown RBP20.41■□□□□ 0.86
NEDD8-201ENST00000250495 ERI2A8K979 691 aaKnown RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 E7EQ34 232 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 GAS8O95995 478 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 FTH1P02794 183 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 MSNP26038 577 aaKnown RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 STIP1P31948 543 aaKnown RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 CD97P48960 835 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 LMAN1P49257 510 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 PGDP52209 483 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 GDF10P55107 478 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 MLLT10P55197 1068 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 ITGA1P56199 1179 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 PLOD1Q02809 727 aaPredicted RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 ZNF789Q5FWF6 425 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 LCN10Q6JVE6 187 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 ELMO1Q92556 727 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 TTC1Q99614 292 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 DPH2Q9BQC3 489 aaPredicted RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 RBSNQ9H1K0 784 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 PIH1D1Q9NWS0 290 aaKnown RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 ANKMY1Q9P2S6 941 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 POLG2Q9UHN1 485 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 MED13Q9UHV7 2174 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 TCFL5Q9UL49 500 aa20.4■□□□□ 0.86
NEDD8-201ENST00000250495 R3HDM2Q9Y2K5 976 aaKnown RBP20.4■□□□□ 0.86
NEDD8-201ENST00000250495 CYSRT1A8MQ03 144 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 F8W8V4 182 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 FTCDO95954 541 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 PDGFAP04085 211 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 AGXTP21549 392 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 SHMT2P34897 504 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 CDH17Q12864 832 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 LYPLAL1Q5VWZ2 237 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 CPZQ66K79 652 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 SPESP1Q6UW49 350 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 PACS1Q6VY07 963 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 SYTL1Q8IYJ3 562 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 TBC1D21Q8IYX1 336 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 GPR135Q8IZ08 494 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 DNAAF3Q8N9W5 541 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 ADAMTS17Q8TE56 1095 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 N4BP2L2Q92802 583 aaPredicted RBP20.39■□□□□ 0.85
NEDD8-201ENST00000250495 NRTNQ99748 197 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 MLXIPLQ9NP71 852 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 ASF1AQ9Y294 204 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 PCDHGB7Q9Y5F8 929 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 PRSS21Q9Y6M0 314 aa20.39■□□□□ 0.85
NEDD8-201ENST00000250495 TTLL8A6PVC2 850 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 OR56A5P0C7T3 313 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 PVRP15151 417 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 PTGIRP43119 386 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 SRSF1Q07955 248 aaKnown RBP eCLIP20.38■□□□□ 0.85
NEDD8-201ENST00000250495 CHAF1BQ13112 559 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 CDHR3Q6ZTQ4 885 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 MICALCLQ6ZW33 695 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 TAB3Q8N5C8 712 aaPredicted RBP20.38■□□□□ 0.85
NEDD8-201ENST00000250495 OR52K1Q8NGK4 314 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 OR5AR1Q8NGP9 310 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 TCTN2Q96GX1 697 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 HES6Q96HZ4 224 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 KLHL25Q9H0H3 589 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 G3BP2Q9UN86 482 aaKnown RBP20.38■□□□□ 0.85
NEDD8-201ENST00000250495 ICKQ9UPZ9 632 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 FLNCQ14315 2725 aa20.38■□□□□ 0.85
NEDD8-201ENST00000250495 TCRBV7S2A1N4TA0A589 114 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CCDC78A2IDD5 438 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 HEATR9A2RTY3 570 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CCDC162PA2VCL2 907 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CLEC18AA5D8T8 446 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 C9J4A7 227 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 ZNF749O43361 778 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 KDM1AO60341 852 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 TMEM63AO94886 807 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CAPN1P07384 714 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 ACADLP28330 430 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 FOXN2P32314 431 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 BRD3Q15059 726 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CCDC38Q502W7 563 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 PAPD7Q5XG87 772 aaKnown RBP20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CLEC18BQ6UXF7 455 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 UNC5AQ6ZN44 842 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 FAM26EQ8N5C1 309 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 EFCAB3Q8N7B9 438 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 CLEC18CQ8NCF0 446 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 UBE2Q2Q8WVN8 375 aa20.37■□□□□ 0.85
NEDD8-201ENST00000250495 C17orf62Q9BQA9 187 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms