RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OGNP20774 298 aaKnown RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PTX3P26022 381 aaPredicted RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 CHRNA5P30532 468 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SLC16A1P53985 500 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF235Q14590 738 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SH3PXD2AQ5TCZ1 1133 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SPRED1Q7Z699 444 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF614Q8N883 585 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 OR51B5Q9H339 312 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 AKTIPQ9H8T0 292 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 CORO2BQ9UQ03 480 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 POLR3HQ9Y535 204 aaPredicted RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 A0A1B0GVI7 797 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 A0A1W2PP18 115 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SDHDO14521 159 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 LHCGRP22888 699 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SLC6A3Q01959 620 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 LSMEM2Q8N112 164 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SLC5A11Q8WWX8 675 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 RBCK1Q9BYM8 510 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 GPR88Q9GZN0 384 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 UFSP2Q9NUQ7 469 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 TAS2R13Q9NYV9 303 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 NENFQ9UMX5 172 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 MRC1P22897 1456 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 TRAV6A0A075B6T7 132 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 LOC105371267A0A1B0GV96 52 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SLC2A3P11169 496 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 HTR1EP28566 365 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 NNMTP40261 264 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 GNPDA1P46926 289 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 MAPKAPK2P49137 400 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 PPP4CP60510 307 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 RABL3Q5HYI8 236 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 TDRD10Q5VZ19 366 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 RAB12Q6IQ22 244 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 C4orf19Q8IY42 314 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 UFD1Q92890 307 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SORT1Q99523 831 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SLX1AQ9BQ83 275 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 TRIM62Q9BVG3 475 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CYTH4Q9UIA0 394 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 PCDHGB5Q9Y5G0 923 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 MN1Q10571 1320 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 IRS2Q9Y4H2 1338 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SMIM22K7EJ46 135 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 PPM1BO75688 479 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 ARP10275 920 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 YWHAQP27348 245 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CDH4P55283 916 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SSTP61278 116 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 RPL38P63173 70 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 STXBP2Q15833 593 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SULF1Q8IWU6 871 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 ART5Q96L15 291 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 PPP1R16BQ96T49 567 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SH3BP4Q9P0V3 963 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 TBC1D24Q9ULP9 559 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SCO2O43819 266 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CHMP24386 653 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 HK3P52790 923 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 ERVK-21P61565 698 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 HNRNPA0Q13151 305 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CYBRD1Q53TN4 286 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CHDHQ8NE62 594 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 HEXDCQ8WVB3 486 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 NELL1Q92832 810 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 LGMNQ99538 433 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 GAL3ST1Q99999 423 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 DPYSL5Q9BPU6 564 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 DTLQ9NZJ0 730 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 FXYD6-FXYD2A0A087WZ82 144 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 ADAMTS3O15072 1205 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CAPN5O15484 640 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 DLX3O60479 287 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 ALDOAP04075 364 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 ARFIP1P53367 373 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 CDK5R2Q13319 367 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 TATDN3Q17R31 274 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SEZ6Q53EL9 994 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 OR2T5Q6IEZ7 315 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 C12orf45Q8N5I9 185 aaPredicted RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 OR2T29Q8NH02 315 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 LURAP1Q96LR2 239 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 MRPL45Q9BRJ2 306 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 FXYD6Q9H0Q3 95 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 FBXO5Q9UKT4 447 aa12.66□□□□□ -0.38
VAMP4-201ENST00000236192 TNPO3Q9Y5L0 923 aaKnown RBP12.66□□□□□ -0.38
VAMP4-201ENST00000236192 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms