RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Fgd2Q8BY35 655 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ablim1Q8K4G5 861 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cryl1Q99KP3 319 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr566A0A1B0GST0 319 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zfp275G3X904 499 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 NapsaO09043 419 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Akap3O88987 864 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 MutP16332 748 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fitm2P59266 262 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 SnnP61807 88 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr538Q7TRT5 310 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Smim14Q91VT8 99 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 BollQ924M5 281 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 HnrnpdlQ9Z130 301 aaKnown RBP15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Man1b1A2AJ15 658 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr1145A2AVC7 325 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ptpn20O55082 426 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pim1P06803 397 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Nudt2P56380 147 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 PrkacbP68181 351 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Smad5P97454 465 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Paqr6Q6TCG5 343 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mfsd6Q8CBH5 775 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prmt5Q8CIG8 637 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Hmgcll1Q8JZS7 343 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Nrif2Q921B4 824 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 RragcQ99K70 398 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 AasdhpptQ9CQF6 309 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Clic3Q9D7P7 237 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prorsd1Q9D820 169 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Htra1Q9R118 480 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 FarsbQ9WUA2 589 aaKnown RBP15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Smim17A0A504 109 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm14459A2BI73 179 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Otud3B1AZ99 396 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Phf11bB4XVQ1 276 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dcpp2E9PYC2 171 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dcpp1L7N1X9 171 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 StacP97306 403 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Slc22a23Q3UHH2 689 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 MafkQ61827 156 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gpr142Q7TQN9 365 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Teddm1bQ8CC62 306 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 MispQ9D279 648 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 EefsecQ9JHW4 583 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fut2Q9JL27 347 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dio2Q9Z1Y9 266 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Myo18aQ9JMH9 2050 aaKnown RBP15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 IqccA2ADZ8 418 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vmn2r120E9PX34 856 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pabpc4lG5E8X2 370 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rundc3aO08576 446 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Bub1O08901 1058 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dnmt3aO88508 908 aaKnown RBP15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ltb4rO88855 351 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Stfa3P35173 103 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Btg3P50615 252 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 CtskP55097 329 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 PgrQ00175 926 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Lingo4Q149C3 593 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gpr149Q3UVY1 732 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 N4bp2l2Q8JZS6 575 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pcdhgb5Q91XX5 926 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Taldo1Q93092 337 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 BniplQ99JU7 328 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Arhgap8Q9CXP4 425 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Abcb9Q9JJ59 762 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 NagaQ9QWR8 415 aa15.29■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vmn1r238E9Q373 306 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zbtb10E9Q8X5 861 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zfp938E9Q9G3 579 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Serpinb9cI7HJI5 387 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm13128L7MU96 475 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gon7P0C8B4 98 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prdx3P20108 257 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 MaxP28574 160 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Sema4aQ62178 760 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 PtprjQ64455 1238 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr1313Q7TQW8 311 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zbtb46Q8BID6 600 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tusc3Q8BTV1 347 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pex5lQ8C437 567 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 SynpoQ8CC35 929 aaKnown RBP15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 GneQ91WG8 722 aaKnown RBP15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prl7c1Q9CRB5 251 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mgrn1Q9D074 532 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Myh9Q8VDD5 1960 aaKnown RBP15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm12248A0A1W2P8B8 313 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr1200A2ATJ4 336 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cdh19E9Q3A7 770 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm2888K7N746 267 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vmn2r112L7N221 857 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vmn2r2L7N2E9 908 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 ThrbP37242 461 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Syt14Q7TN84 555 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pdcd2lQ8C5N5 364 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tmcc3Q8R310 477 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vps4aQ8VEJ9 437 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr853Q8VGG6 305 aa15.28■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 NoboxQ8VIH1 527 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms