RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Kansl2Q8BQR4 486 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 SowahcQ8C0J6 512 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cstf2tQ8C7E9 632 aaKnown RBP22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 ZwilchQ8R060 589 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Apbb3Q8R1C9 486 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 HnmtQ91VF2 295 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Vps11Q91W86 941 aaKnown RBP22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Krt5Q922U2 580 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Rex1bdQ9CYZ6 169 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Syvn1Q9DBY1 612 aa22.23■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Lzts3A2AHG0 700 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Nt5c1aA3KFX0 365 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Gm15155B1B034 138 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Rrn3B2RS91 656 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Srsf5O35326 269 aaKnown RBP22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Kcnc1P15388 511 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Fgf14P70379 247 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 F8a1Q00558 380 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cpne9Q1RLL3 553 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Eps15l1Q60902 907 aaKnown RBP22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 RgnQ64374 299 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Zswim9Q6DI92 447 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Kiss1Q6Y4S4 130 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Zfp57Q8C6P8 421 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Acat2Q8CAY6 397 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Acsm2Q8K0L3 575 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Kctd5Q8VC57 234 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Nipal2Q91WC7 383 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Smad9Q9JIW5 430 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Arl10Q9QXJ4 243 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Rgs20Q9QZB1 239 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 CorinQ9Z319 1113 aa22.22■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Fam91a1Q3UVG3 837 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cage1Q5IR70 849 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Fzd3Q61086 666 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Tshz2Q68FE9 1030 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Dnajc6Q80TZ3 938 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Fam110bQ8C739 366 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Dync1li1Q8R1Q8 523 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Mthfd1Q922D8 935 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Snx2Q9CWK8 519 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Wdr73Q9CWR1 371 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Bag6Q9Z1R2 1154 aaKnown RBP22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Alms1Q8K4E0 3251 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 A0A1Y7VP24 259 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Ssxb6A2BI74 170 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 2210016F16RikG3X8U3 338 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Vmn2r65G3X931 845 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Rhox2gL7MUB9 191 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Ebf2O08792 575 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Hs3st1O35310 311 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Pde9aO70628 534 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Hoxb3P09026 433 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Gpc4P51655 557 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 PctpP53808 214 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cuzd1P70412 606 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 TekQ02858 1122 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Irf4Q64287 450 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cyp2d40Q6P8N9 338 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 IpmkQ7TT16 396 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 DdnQ80TS7 710 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Psmd11Q8BG32 422 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Tubgcp5Q8BKN5 1024 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 HibchQ8QZS1 385 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Vmn1r185Q8R299 319 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Mrpl1Q99N96 336 aaKnown RBP22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 ItpaQ9D892 198 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Glod5Q9D8I3 148 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Q9DAR0 182 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Acsl4Q9QUJ7 711 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Dcun1d1Q9QZ73 259 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Slc8a3S4R2P9 928 aa22.21■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Gm6509A0A0J9YUV1 481 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Vmn2r96E9PZU5 664 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Gm6351K9J7D1 481 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Vmn2r8L7N472 848 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Azin1O35484 448 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Tpst2O88856 376 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 P01664 111 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Zfp14P10755 501 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Csf2rb2P26954 878 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Rps17P63276 135 aaKnown RBP22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Hrh1P70174 488 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 RalgdsQ03385 852 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Cdk18Q04899 451 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Kcnc2Q14B80 642 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Pag1Q3U1F9 429 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Pcnx4Q3UVY5 1174 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Als2clQ60I26 952 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 SvoplQ6PDF3 494 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Ppp2r1bQ7TNP2 601 aaKnown RBP22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Olfr664Q7TRP5 306 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Ppp4r4Q8C0Y0 875 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Camk1gQ91VB2 477 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Fam227aQ9D3V8 625 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Dus2Q9D7B1 493 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Cyp3a44Q9EQW4 504 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Lima1Q9ERG0 753 aaKnown RBP22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Slc25a14Q9Z2B2 325 aa22.2■■□□□ 1.14
Scn1b-201ENSMUST00000098548 Atg2bQ80XK6 2075 aa22.19■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms