RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 UrodP70697 367 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Larp4bQ6A0A2 741 aaKnown RBP11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Zmpste24Q80W54 475 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Vps26bQ8C0E2 336 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Tspan8Q8R3G9 235 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Olfr444Q8VFS6 310 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 CarfQ8VHI4 689 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Aim2Q91VJ1 354 aaKnown RBP11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Efcab1Q9D3N2 212 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Actl11Q9D5V1 1207 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Chrm3Q9ERZ3 589 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Grm3Q9QYS2 879 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gm43951A0A0N4SUT6 962 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gm34653A0A1L1SR01 368 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Slc9a6A1L3P4 702 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Dmrtb1A2A9I7 359 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Dpy19l4A2AJQ3 722 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Znf382B2RXC5 579 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gm8127E9Q0P0 100 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gm8094K7N6U8 211 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Vmn2r46L7N282 809 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Grcc10O35127 126 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Il1rnP25085 178 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 StamP70297 548 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Cdh8P97291 799 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Dtx3lQ3UIR3 748 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Rtl3Q6P1Y1 553 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Serpina12Q7TMF5 413 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Rpf1Q7TND5 349 aaKnown RBP11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Lamtor4Q8CF66 99 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Ahi1Q8K3E5 1047 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 GabrpQ8QZW7 440 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Pcdhgb2Q91XX7 928 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Brinp1Q920P3 760 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Spaca7Q9D2S4 182 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Cul2Q9D4H8 745 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Cntd1Q9D995 334 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Cpne6Q9Z140 557 aa11.28□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gm28576A0A087WRP6 222 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Olfr1215A3KGY3 312 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Serpina3iD3Z450 408 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 FgaE9PV24 789 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Trim30bE9PVL6 203 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Vmn2r14E9Q759 848 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Olfr726E9Q8X3 321 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Tmem200cJ3QK46 637 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Vti1aO89116 217 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Mtco1P00397 514 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 IapP03975 557 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Ccnd3P30282 292 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 YwhaqP68254 245 aaKnown RBP11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Q3TYS2 187 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gm5113Q3UGK8 141 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Gtpbp2Q3UJK4 602 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Scn2bQ56A07 215 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Q6GQV0 436 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Rps27lQ6ZWY3 84 aaKnown RBP11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Zbtb5Q7TQG0 670 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Kirrel1Q80W68 789 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Fignl1Q8BPY9 683 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Utp15Q8C7V3 528 aaKnown RBP11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Prokr2Q8K458 381 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Mcfd2Q8K5B2 145 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 FktnQ8R507 461 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Mccc1Q99MR8 717 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Pih1d1Q9CQJ2 290 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Rnase10Q9D5A9 208 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 UqcrbQ9D855 111 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Nufip1Q9QXX8 484 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 Mad2l1Q9Z1B5 205 aa11.27□□□□□ -0.6
Ssh1-201ENSMUST00000077689 SisF8VQM5 1818 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Gm14401A2ARV7 303 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Ccnyl1D3YUJ3 367 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Gm17535J3KMR8 224 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Usp2O88623 613 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Hoxc5P32043 222 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Tlx1P43345 332 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 BckdhaP50136 442 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Igfbp5Q07079 271 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 FAM120AQ6A0A9 1112 aaKnown RBP11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Krba1Q6NXZ1 1043 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 SepsecsQ6P6M7 504 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Mrgprb8Q7TN51 330 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Mettl27Q8BGM4 238 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Neto2Q8BNJ6 525 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Q8K039 155 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Acsm2Q8K0L3 575 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Ces2aQ8QZR3 558 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Tbc1d13Q8R3D1 400 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Uhrf1Q8VDF2 782 aaKnown RBP11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Olfr447Q8VGP6 310 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Odf4Q8VI88 290 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Ppp1r16aQ923M0 524 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Me2Q99KE1 589 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Cep41Q99NF3 373 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Gm3404Q9D506 307 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Pop7Q9DCH2 140 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Gmeb1Q9JL60 562 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Cdh22Q9WTP5 813 aa11.27□□□□□ -0.61
Ssh1-201ENSMUST00000077689 Akt3Q9WUA6 479 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms