RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Afg3l1Q920A7 789 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cstf3Q99LI7 717 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Nsmce3Q9CPR8 279 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cd302Q9DCG2 228 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 MkksQ9JI70 570 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pus1Q9WU56 423 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mettl1Q9Z120 268 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Flt4P35917 1363 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trbv3A0A0A6YYE2 117 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ect2lA0A140LIP2 953 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lcn6A2AJB9 181 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm20547B8JJN0 1276 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm3072F6SKY8 209 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm6882J3KMT3 313 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FurinP23188 793 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Nr5a2P45448 560 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gpc4P51655 557 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rab42Q0PD08 215 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Aars2Q14CH7 980 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Aarsd1Q3THG9 412 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CamkvQ3UHL1 512 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Map3k2Q61083 619 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 AtraidQ6PGD0 223 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 TwistnbQ78WZ7 330 aaKnown RBP8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rtn4rl2Q7M6Z0 420 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr1065Q7TR70 313 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pum2Q80U58 1066 aaKnown RBP8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Nlgn3Q8BYM5 825 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gbp5Q8CFB4 590 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cdc73Q8JZM7 531 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lin7aQ8JZS0 233 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pitrm1Q8K411 1036 aaKnown RBP8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr799Q8VGI7 311 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 S1pr5Q91X56 400 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lims2Q91XD2 341 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CtsqQ91ZF4 343 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Hyal1Q91ZJ9 462 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Kif19Q99PT9 997 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 ApmapQ9D7N9 415 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Naa16Q9DBB4 864 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Inpp4aQ9EPW0 939 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Wdr54Q9R0D8 334 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mixl1Q9WUI0 231 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ank1Q02357 1862 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr1480A0A140LIR8 359 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bpifb9bA2AJD1 591 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fam209A2APA5 170 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fam46dB1ATX6 390 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr173E9QAT7 321 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm16434J3QN10 205 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm19965J3QNY8 723 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm8356J3QPD3 205 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 4930555G01RikL7N253 205 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ppef2O35385 757 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Zfp1P08042 402 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Serpind1P49182 478 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gabrr2P56476 465 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Coq8bQ566J8 533 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sox17Q61473 419 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tfdp2Q64163 446 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fcrl5Q68SN8 596 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bhlhb9Q6PB60 539 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ces2bQ6PDB7 556 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Chil6Q80W26 440 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cpeb2Q812E0 521 aaKnown RBP8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tmem177Q8BPE4 311 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 GmppbQ8BTZ7 360 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bbs4Q8C1Z7 520 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sphk1Q8CI15 382 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cd209bQ8CJ91 325 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fmo2Q8K2I3 535 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Guca1bQ8VBV8 201 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Elf5Q8VDK3 253 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Errfi1Q99JZ7 461 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 4933400A11RikQ9CR52 288 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mms19Q9D071 1031 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ttc9bQ9D6E4 239 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rmdn1Q9DCV4 305 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ninj2Q9JL89 143 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cxcl14Q9WUQ5 99 aa8.91□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Disp3A3KFU9 1347 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trav13n-4A0A0G2JG01 110 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm45713A0A1B0GS68 446 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pramef20B1ARV6 477 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Apol11aE9PZG0 334 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Esp34G3UXG0 151 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FshrP35378 692 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Elk4P41158 430 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CratP47934 626 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Prox1P48437 737 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ppp3caP63328 521 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CtscP97821 462 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 ZbbxQ0P5X5 716 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trip13Q3UA06 432 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Sorbs2Q3UTJ2 1180 aaKnown RBP8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cfap52Q5F201 620 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 5730522E02RikQ5SP45 163 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rsad1Q5SUV1 442 aa8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Kat7Q5SVQ0 613 aaKnown RBP8.9□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CttnQ60598 546 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms