RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Fubp1Q91WJ8 651 aaKnown RBP8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Cryl1Q99KP3 319 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gstt3Q99L20 241 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gins4Q99LZ3 223 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Ppp6cQ9CQR6 305 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Pbld2Q9CXN7 288 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Spcs2Q9CYN2 226 aaKnown RBP8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 GarsQ9CZD3 729 aaKnown RBP8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 CinpQ9D0V8 212 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Gmeb1Q9JL60 562 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Nme7Q9QXL8 395 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 H2afb2S4R1M3 115 aa8.15□□□□□ -1.1
Cdc40-201ENSMUST00000044166 Shroom3Q9QXN0 1986 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr1200A2ATJ4 336 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Orm2P07361 207 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Aldh1a1P24549 501 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ptpn22P29352 802 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Polr1cP52432 346 aaKnown RBP8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 AbrQ5SSL4 859 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 ArhgdibQ61599 200 aaKnown RBP8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Six3Q62233 333 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zc3hc1Q80YV2 501 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Mup21Q80YX8 181 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tmem260Q8BMD6 703 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Prdm8Q8BZ97 687 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Piwil2Q8CDG1 971 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Akr1c13Q8VC28 323 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rbms2Q8VC70 383 aaKnown RBP8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hip1Q8VD75 1029 aaKnown RBP8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Depdc7Q91WS7 511 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Pskh1Q91YA2 424 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tfap2dQ91ZK0 452 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Prpsap1Q9D0M1 356 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Actr6Q9D864 396 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Slco2a1Q9EPT5 643 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Htatip2Q9Z2G9 242 aa8.15□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Smim17A0A504 109 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm11758A2BEI6 360 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm11757A2BEI8 360 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 D830030K20RikE9PYQ5 218 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cyp2j8G3UZ38 503 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rnpepl1G5E872 720 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm3336J3QMQ6 198 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm16440K7N6G6 218 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm2244L7N2A3 218 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm3278L7N2D2 218 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm8271L7N2E2 218 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm8050L7N2E3 205 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Adam19O35674 920 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Kcnj1O88335 372 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Csn1s1P19228 313 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cox4i1P19783 169 aaKnown RBP8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Kcnab3P97382 249 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Grin2cQ01098 1239 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Nfe2Q07279 373 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Aarsd1Q3THG9 412 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 GmpsQ3THK7 693 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Otud5Q3U2S4 566 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tnks2Q3UES3 1166 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Slc34a1Q60825 637 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tspan7Q62283 249 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 XpaQ64267 272 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp512bQ6PHP4 879 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 MroQ7TNB4 248 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fbxl21Q8BFZ4 434 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tprg1Q8CB49 279 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ebf4Q8K4J2 599 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Elac1Q8VEB6 362 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cdkal1Q91WE6 578 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 TmlheQ91ZE0 421 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Dio3Q91ZI8 304 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Retreg3Q9CQV4 466 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Dnajb9Q9QYI6 222 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Spin2gA0A0N4SW15 236 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Lgr4A2ARI4 951 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr726E9Q8X3 321 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm37240E9QAY5 252 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Spin2eJ3QNQ0 234 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm3642K7N6V4 267 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm8926L7MUE8 181 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gjd2O54851 321 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rdh7O88451 316 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ctbp1O88712 441 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ccr5P51682 354 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hmgcs2P54869 508 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 NyxP83503 476 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr725Q05A45 321 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Krt2Q3TTY5 707 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Esrp1Q3US41 680 aaKnown RBP8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Snx33Q4VAA7 574 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ipcef1Q5DU31 406 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Bhlha9Q5RJB0 231 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Icam5Q60625 917 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Lcp1Q61233 627 aaKnown RBP8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Traf4Q61382 470 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Arhgap19Q8BRH3 494 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Kyat1Q8BTY1 424 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Map1sQ8C052 973 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 ManbaQ8K2I4 879 aa8.14□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Pcdhb17Q91VD8 799 aa8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms