RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Yipf4Q8C407 246 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 RhojQ9ER71 214 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fam46dB1ATX6 390 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mfsd14aP70187 490 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mrpl10Q3TBW2 262 aaKnown RBP13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cyb5r4Q3TDX8 528 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Abhd15Q5F2F2 459 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Xkr4Q5GH67 647 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zdhhc20Q5Y5T1 380 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr299Q7TS05 330 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 4930550L24RikQ99PA7 320 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ism2D3Z6A3 493 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 GlrbP48168 496 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Igsf9Q05BQ1 1179 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lrrc55Q3UY51 311 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc39a12Q5FWH7 689 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Six2Q62232 296 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vamp1Q62442 118 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ube2r2Q6ZWZ2 238 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dppa4Q8CCG4 296 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cntnap5cQ0V8T7 1305 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp738B8JJX8 793 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm6205E9PZS2 359 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pld3O35405 488 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cbx4O55187 551 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 EpxP49290 716 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mrgprb1Q3UG61 350 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Polr2mQ6P6I6 366 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 4933430I17RikQ8BHW4 495 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Csgalnact1Q8BJQ9 530 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gpr150Q8BL07 427 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Glt28d2Q8BML3 165 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rasal3Q8C2K5 1041 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Nadk2Q8C5H8 452 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm6367Q8C6L9 287 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sgpl1Q8R0X7 568 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Snrnp25Q8VIK1 123 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tomm20lQ9D4V6 152 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mcemp1Q9D8U6 183 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 LdhcP00342 332 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ttc29Q80VM3 471 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc30a6Q8BJM5 460 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 CptpQ8BS40 216 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Samd3Q8C4H2 520 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr165Q8VFA2 313 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 TmlheQ91ZE0 421 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fam122cQ9D5J5 180 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Snap29Q9ERB0 260 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm5493S4R2D1 92 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Kctd18E0CZ26 429 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lipo3Q3UT41 399 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Amigo3Q8C2S7 508 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dlgap5Q8K4R9 808 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sumf1Q8R0F3 372 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc22a19Q8VCA0 551 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 RTRAFQ9CQE8 244 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dlg5E9Q9R9 1921 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 UprtB1AVZ0 310 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm8104K7N744 198 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Resp18P47939 175 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Itga11P61622 1188 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vps45P97390 570 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fam46cQ5SSF7 391 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp438Q8BFX2 798 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ces2eQ8BK48 559 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cyp20a1Q8BKE6 462 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Wnt9aQ8R5M2 365 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Apobec3Q99J72 440 aaKnown RBP13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 FarsbQ9WUA2 589 aaKnown RBP13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc25a14Q9Z2B2 325 aa13.76□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm17026K7N6Z0 213 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Vmn2r70K7N702 854 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Scamp3O35609 349 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Snx3O70492 162 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 St14P56677 855 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 GuloP58710 440 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 UrodP70697 367 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 CenplQ3U3S3 329 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 G2e3Q5RJY2 716 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rasgef1bQ8JZL7 473 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ate1Q9Z2A5 516 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Nrxn1Q9CS84 1514 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Grpel2O88396 224 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 GhrP16882 650 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 LipcP27656 510 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cdk10Q3UMM4 360 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Taf1cQ6PDZ2 836 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Trpm4Q7TN37 1213 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lrrc39Q8BGI7 337 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dennd1cQ8CFK6 786 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cts3Q91ZD5 332 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cybrd1Q925G2 290 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Serinc3Q9QZI9 472 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc26a3Q9WVC8 757 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 NapsaO09043 419 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ephx2P34914 554 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lgr6Q3UVD5 967 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tcaf3Q6QR59 914 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr1231Q7TQZ8 313 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cmtr2Q8BWQ4 767 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms