RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Coq6Q8R1S0 476 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cdhr5Q8VHF2 831 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pcdh18Q8VHR0 1134 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Depdc7Q91WS7 511 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Chmp1b1Q99LU0 199 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Det1Q9D0A0 550 aa8.34□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tex28B1AYN9 409 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 MbP04247 154 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Matn1P51942 500 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cdh5P55284 784 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ptchd3Q0EEE2 906 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fzd6Q61089 709 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Snx8Q8CFD4 459 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dclre1cQ8K4J0 705 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Uts2rQ8VIH9 385 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 B4galt3Q91YY2 395 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rsl24d1Q99L28 163 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 ScelQ9EQG3 652 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Cyp3a44Q9EQW4 504 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ern1Q9EQY0 977 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gsk3bQ9WV60 420 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 2610028H24RikG5E8K1 270 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm3755K7N743 167 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm10324L7N208 604 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Neu1O35657 409 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ltb4rO88855 351 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ptger3P30557 365 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 S100a13P97352 98 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Pld2P97813 933 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mdga1Q0PMG2 940 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Hddc2Q3SXD3 199 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Defa17Q64016 82 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Lix1Q6P566 282 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Wdr26Q8C6G8 641 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 BroxQ8K2Q7 411 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 KptnQ8VCX6 430 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 PrkxQ922R0 355 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Fam32aQ9CR80 112 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Batf3Q9D275 118 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gsdmdc1Q9D8T2 487 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Abt1Q9QYL7 269 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 FarsbQ9WUA2 589 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Osbpl10S4R1M9 766 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Igkv18-36A0A075B5M9 114 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zfp384E9Q1A5 584 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Zscan4bE9Q3G0 505 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gm29394H3BIW7 199 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mtnd2P03893 345 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 SmoP56726 793 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 EpycP70186 322 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ankrd13bQ5F259 626 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Trmt2bQ8BQJ6 493 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Sh3rf2Q8BZT2 735 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Mcoln3Q8R4F0 553 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Acer3Q9D099 267 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Aldh7a1Q9DBF1 539 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr706Q9EPF8 316 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Slc19a2Q9EQN9 498 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 CpqQ9WVJ3 470 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Tcte1A6H639 498 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Otud3B1AZ99 396 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmn2r112L7N221 857 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 H2-M9O19442 342 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vti1bO88384 232 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 P01669 111 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 LynP25911 512 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 WarsP32921 481 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Upp1P52624 311 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Rps14P62264 151 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 IgfalsP70389 603 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Lmf1Q3U3R4 574 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 RasefQ5RI75 627 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 AbrQ5SSL4 859 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Adora2bQ60614 332 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Adamts16Q69Z28 1222 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gpr17Q6NS65 339 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Taf1cQ6PDZ2 836 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Peli3Q8BXR6 445 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Dio3Q91ZI8 304 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Vmp1Q99KU0 406 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 SqorQ9R112 450 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 G430095P16RikE9Q913 147 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr694K7N641 315 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Bcl7cO08664 217 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Map2k3O09110 347 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 PdynO35417 248 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 P01810 119 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 SrgnP13609 152 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Gria1P23818 907 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Entpd1P55772 510 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Magee2Q52KG3 523 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ccdc85bQ6PDY0 202 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 4931406P16RikQ8C5X1 1059 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 N4bp2l2Q8JZS6 575 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Chchd4Q8VEA4 139 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Olfr808Q8VGI8 312 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Ptbp2Q91Z31 531 aaKnown RBP8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 TrmuQ9DAT5 417 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Nrip2Q9JHR9 270 aa8.33□□□□□ -1.08
Sf3b1-201ENSMUST00000027127 Prl5a1Q9JII2 230 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms