RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Aif1O70200 147 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Il11ra2P70225 432 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 GaltQ03249 379 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 WhammQ571B6 793 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Krt72Q6IME9 520 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Glcci1Q8K3I9 537 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Sgip1Q8VD37 806 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Slc44a3Q921V7 656 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Srfbp1Q9CZ91 441 aaKnown RBP16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 MajinQ9D992 256 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 TrilQ9DBY4 809 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Snap29Q9ERB0 260 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 E2f3O35261 457 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 AldocP05063 363 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Zfp39Q02525 718 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Hhla1Q3TYV2 514 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Tnks2Q3UES3 1166 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Q5EBG8 199 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 VwdeQ6DFV8 926 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 DglucyQ8BH86 617 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Tyw1Q8BJM7 721 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Dcaf12l1Q8CBW4 501 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr1250Q8VGM3 314 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Nrif1Q923B3 828 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Cmtm7Q9ESD6 167 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 HephQ9Z0Z4 1157 aa16.14■□□□□ 0.17
Shh-201ENSMUST00000002708 Myo10F8VQB6 2062 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm8267E9Q207 261 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 St3gal5O88829 414 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Eno2P17183 434 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Esr1P19785 599 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Irf7P70434 457 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 DsppP97399 934 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Tmc5Q32NZ6 967 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 CenplQ3U3S3 329 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 SctrQ5FWI2 447 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 HadhQ61425 314 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Nr6a1Q64249 495 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Adam39Q7M762 756 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Prox2Q8BII1 593 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Nprl3Q8VIJ8 569 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Htatip2Q9Z2G9 242 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r73D3Z7M3 851 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm6502L7N456 481 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Stx7O70439 261 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Sp1O89090 784 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 P01878 344 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Galnt3P70419 633 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Arf5P84084 180 aaKnown RBP16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Ankrd27Q3UMR0 1048 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Lcp2Q60787 533 aaKnown RBP16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Cnih3Q6ZWS4 160 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Kctd11Q8K485 232 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Ces2aQ8QZR3 558 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Eml3Q8VC03 897 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr352Q8VGJ9 315 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Chid1Q922Q9 393 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Hcar2Q9EP66 360 aa16.13■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm30302A0A1Y7VN40 1110 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Pnldc1B2RXZ1 531 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Cyp4a14O35728 507 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Hcn1O88704 910 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Ptpn22P29352 802 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Hoxc11P31313 304 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 AhcyP50247 432 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Lrrc3P59034 257 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Kcnab2P62482 367 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Ctps1P70698 591 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Usp7Q6A4J8 1103 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Dna2Q6ZQJ5 1062 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Ubr7Q8BU04 425 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Casp9Q8C3Q9 454 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Tmem30aQ8VEK0 364 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr854Q8VFF1 315 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Mrpl1Q99N96 336 aaKnown RBP16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 XpotQ9CRT8 963 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Haus5Q9D786 619 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Aldoart2A6ZI47 364 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 S100zB9EJL3 99 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Vsig10lD3YZF7 868 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r50E9PW61 861 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Il13ra1O09030 424 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 BgnP28653 369 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Pdha2P35487 391 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Gadd45aP48316 165 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Inpp1P49442 396 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Pdx1P52946 284 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 SgcdP82347 289 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Eif2ak2Q03963 515 aaKnown RBP16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Bpifa6Q0VGU8 367 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 SynaQ5G5D5 617 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Krtcap2Q5RL79 136 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 KdsrQ6GV12 332 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 ManealQ6P1J0 452 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Fam126aQ6P9N1 521 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Q8BHR8 331 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Znf668Q8K2R5 619 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr1311Q8VET0 312 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Ankrd54Q91WK7 299 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Lactb2Q99KR3 288 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms