RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CCDC25Q86WR0 208 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 APLFQ8IW19 511 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 TRIM48Q8IWZ4 208 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 GALNT11Q8NCW6 608 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FBXO25Q8TCJ0 367 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 SSC4DQ8WTU2 575 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 SEC14L1Q92503 715 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 IMP4Q96G21 291 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 OXNAD1Q96HP4 312 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FMO2Q99518 471 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 APOL2Q9BQE5 337 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 MLPHQ9BV36 600 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FICDQ9BVA6 458 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FAM129AQ9BZQ8 928 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 EPB41L1Q9H4G0 881 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FAM83DQ9H4H8 585 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 LRRC40Q9H9A6 602 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 RMI1Q9H9A7 625 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 EIF2B3Q9NR50 452 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 PKD2L2Q9NZM6 624 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FAM153AQ9UHL3 310 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 AAR2Q9Y312 384 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 PCDHGA6Q9Y5G7 932 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 CREBBPQ92793 2442 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 CSMD1Q96PZ7 3565 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 TCRBV7S3A2A0A539 114 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ARGFXA6NJG6 315 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 OR5K4A6NMS3 321 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ERI2A8K979 691 aaKnown RBP9.8□□□□□ -0.84
PHGDH-222ENST00000641587 SMAPO00193 183 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ERLIN1O75477 346 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 SORBS2O94875 1100 aaKnown RBP9.8□□□□□ -0.84
PHGDH-222ENST00000641587 TMEM63AO94886 807 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 AP2A1O95782 977 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 MMP2P08253 660 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 FOLR1P15328 257 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 XRCC1P18887 633 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-222ENST00000641587 CA4P22748 312 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 CES1P23141 567 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 TNFRSF8P28908 595 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 WNT3AP56704 352 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 SARNPP82979 210 aaKnown RBP9.8□□□□□ -0.84
PHGDH-222ENST00000641587 MPP3Q13368 585 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 GPR18Q14330 331 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 IL11RAQ14626 422 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 EIF2S3LQ2VIR3 472 aaKnown RBP9.8□□□□□ -0.84
PHGDH-222ENST00000641587 FAM69BQ5VUD6 431 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 PWWP2BQ6NUJ5 590 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 IRGCQ6NXR0 463 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ZDHHC24Q6UX98 284 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 PRSS42Q7Z5A4 293 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ADGRG6Q86SQ4 1221 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 PPP1R3BQ86XI6 285 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ZNF547Q8IVP9 402 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 NAT8LQ8N9F0 302 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 GPR26Q8NDV2 337 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 KLHL6Q8WZ60 621 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 LYSMD1Q96S90 227 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 TBL1YQ9BQ87 522 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 GORASP1Q9BQQ3 440 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 SPATA16Q9BXB7 569 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 UCK1Q9HA47 277 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 CASS4Q9NQ75 786 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ARGLU1Q9NWB6 273 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-222ENST00000641587 KCND3Q9UK17 655 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 PADI1Q9ULC6 663 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 MAP4K5Q9Y4K4 846 aa9.8□□□□□ -0.84
PHGDH-222ENST00000641587 ITPR2Q14571 2701 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 SPTBP11277 2137 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 PCSK5Q92824 1860 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 IGHV5-51A0A0C4DH38 117 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 ANKRD66B4E2M5 251 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 BHMG1C9JSJ3 638 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-222ENST00000641587 CHUKO15111 745 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 SLC25A14O95258 325 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-222ENST00000641587 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 EBLN1P0CF75 366 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 MYBL2P10244 700 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 NELFEP18615 380 aaKnown RBP9.79□□□□□ -0.84
PHGDH-222ENST00000641587 CCL11P51671 97 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 CLCNKAP51800 687 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 PGDP52209 483 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 ARL4CP56559 192 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 CDK16Q00536 496 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 TUBB3Q13509 450 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 OLIG2Q13516 323 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 LAMB3Q13751 1172 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 BRD3Q15059 726 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 HIF1AQ16665 826 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.79□□□□□ -0.846e-6■■■■□ 21.1
PHGDH-222ENST00000641587 CEP128Q6ZU80 1094 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 LINC00523Q86TU6 105 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 PDIK1LQ8N165 341 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 TTC30BQ8N4P2 665 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 SLC25A41Q8N5S1 370 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 DNAAF3Q8N9W5 541 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 GPR150Q8NGU9 434 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 GLYATL1Q969I3 302 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 SLC25A23Q9BV35 468 aa9.79□□□□□ -0.84
PHGDH-222ENST00000641587 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms