RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 COILP38432 576 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-207ENST00000639857 PREPP48147 710 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 FNTAP49354 379 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 HSD11B2P80365 405 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 GPS1Q13098 491 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 SYTL3Q4VX76 610 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-207ENST00000639857 TTC27Q6P3X3 843 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 CCDC137Q6PK04 289 aaKnown RBP17.22■□□□□ 0.35
PTPN11-207ENST00000639857 MICALCLQ6ZW33 695 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 PPP1R3BQ86XI6 285 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 D2HGDHQ8N465 521 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 SIDT2Q8NBJ9 832 aaKnown RBP17.22■□□□□ 0.35
PTPN11-207ENST00000639857 JPH3Q8WXH2 748 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-207ENST00000639857 PDLIM2Q96JY6 352 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 MAP3K3Q99759 626 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 CARD6Q9BX69 1037 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 ULBP3Q9BZM4 244 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 POLG2Q9UHN1 485 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 SOX13Q9UN79 622 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 BTRCQ9Y297 605 aa17.22■□□□□ 0.35
PTPN11-207ENST00000639857 COL6A6A6NMZ7 2263 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
PTPN11-207ENST00000639857 CD3EAPO15446 510 aaKnown RBP17.21■□□□□ 0.35
PTPN11-207ENST00000639857 OR1I1O60431 355 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 PHF2O75151 1096 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 ARL4DP49703 201 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 SH3BP2P78314 561 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 SRSF6Q13247 344 aaKnown RBP17.21■□□□□ 0.35
PTPN11-207ENST00000639857 TUBB3Q13509 450 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 SEMA3AQ14563 771 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 PCSK4Q6UW60 755 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 TBC1D21Q8IYX1 336 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 MCUQ8NE86 351 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 OR4E2Q8NGC2 313 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 OR52E1Q8NGJ3 308 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 OR8K5Q8NH50 307 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 ASZ1Q8WWH4 475 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 MS4A14Q96JA4 679 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 AP1M1Q9BXS5 423 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 XAB2Q9HCS7 855 aaKnown RBP17.21■□□□□ 0.35
PTPN11-207ENST00000639857 C1GALT1Q9NS00 363 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 SYBUQ9NX95 663 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 RARRES3Q9UL19 164 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 NEU2Q9Y3R4 380 aa17.21■□□□□ 0.35
PTPN11-207ENST00000639857 PFDN6O15212 129 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 MT-ND3P03897 115 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 MSL3P1P0C860 447 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 LIFP15018 202 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 TCP1P17987 556 aaKnown RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 RPS3P23396 243 aaKnown RBP eCLIP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 MGAT1P26572 445 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 NMBRP28336 390 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 SHMT2P34897 504 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 STAT5AP42229 794 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 KPNA2P52292 529 aaKnown RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 CRADDP78560 199 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 CRTC2Q53ET0 693 aaPredicted RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 TMTC4Q5T4D3 741 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 RNF187Q5TA31 235 aaPredicted RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 KIAA1614Q5VZ46 1190 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 KIAA0930Q6ICG6 404 aaPredicted RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 MRNIPQ6NTE8 343 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 TIPARPQ7Z3E1 657 aaKnown RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 AMIGO1Q86WK6 493 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 RASGRP3Q8IV61 690 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 SLC22A15Q8IZD6 547 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 OR5K2Q8NHB8 316 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 COG1Q8WTW3 980 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 CPT1BQ92523 772 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 SLC45A3Q96JT2 553 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 PANX3Q96QZ0 392 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 TCF12Q99081 682 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 PITPNM3Q9BZ71 974 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 GPN2Q9H9Y4 310 aaPredicted RBP17.2■□□□□ 0.34
PTPN11-207ENST00000639857 SYTL2Q9HCH5 934 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 LATS2Q9NRM7 1088 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 GNPTGQ9UJJ9 305 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 ASF1AQ9Y294 204 aa17.2■□□□□ 0.34
PTPN11-207ENST00000639857 TCRBV7S3A2A0A539 114 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 MAGEB16A2A368 324 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 ZNF891A8MT65 544 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-207ENST00000639857 C2orf74A8MZ97 194 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 BHMG1C9JSJ3 638 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-207ENST00000639857 KPNA5O15131 536 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 RPN2P04844 631 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 APOA4P06727 396 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 PAMP19021 973 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 POLR2CP19387 275 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-207ENST00000639857 WT1P19544 449 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-207ENST00000639857 VPS41P49754 854 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 TUBB4BP68371 445 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 TUBB2AQ13885 445 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 TMED2Q15363 201 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 TRIP13Q15645 432 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-207ENST00000639857 TYSND1Q2T9J0 566 aa17.19■□□□□ 0.34
PTPN11-207ENST00000639857 C6orf15Q6UXA7 325 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms