RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 POLR1BQ9H9Y6 1135 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 WDR41Q9HAD4 459 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MYOZ1Q9NP98 299 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TMEM184CQ9NVA4 438 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 IL20RAQ9UHF4 553 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PTPN22Q9Y2R2 807 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 UGT2A1Q9Y4X1 527 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SAMD9Q5K651 1589 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MED12Q93074 2177 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 A0A087WV62 115 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TRABD2BA6NFA1 517 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 A6NL46 340 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SUPT3HB4E1H0 165 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MATN3O15232 486 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GPR39O43194 453 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PGK1P00558 417 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 FAM86B2P0C5J1 330 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TRIM49P0CI25 452 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TRIM49CP0CI26 452 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CKMT1AP12532 417 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 DPEP1P16444 411 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MC5RP33032 325 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ORC2Q13416 577 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PTGR1Q14914 329 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 UGT3A2Q3SY77 523 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 UBXN11Q5T124 520 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ARMC12Q5T9G4 340 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NT5DC1Q5TFE4 455 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 OR6B2Q6IFH4 312 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TPCN2Q8NHX9 752 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ATG4CQ96DT6 458 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PTDSS2Q9BVG9 487 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TSSK1BQ9BXA7 367 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MYEF2Q9P2K5 600 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 XDHP47989 1333 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SYNGAP1Q96PV0 1343 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 C6orf229H3BNL8 230 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 AURKAO14965 403 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ATE1O95260 518 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 F9P00740 461 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PCCAP05165 728 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 HMBSP08397 361 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CALCBP10092 127 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PPP3CBP16298 524 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 EPHB2P29323 1055 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ERP29P30040 261 aaKnown RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 HOXA7P31268 230 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CEBPAP49715 358 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 HUNKP57058 714 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MRPS22P82650 360 aaKnown RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 NR1H3Q13133 447 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MED22Q15528 200 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 LHFPL2Q6ZUX7 228 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 GPR155Q7Z3F1 870 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ANKLE1Q8NAG6 615 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 OR5J2Q8NH18 312 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 BBS10Q8TAM1 723 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PPP4R1Q8TF05 950 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CASKIN2Q8WXE0 1202 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF347Q96SE7 839 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MAPKAP1Q9BPZ7 522 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 RNF32Q9H0A6 362 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ING2Q9H160 280 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SAR1AQ9NR31 198 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PCDHA10Q9Y5I2 948 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 FANCMQ8IYD8 2048 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 BLACEA4D250 179 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CYR61O00622 381 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ERN1O75460 977 aaKnown RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MMP2P08253 660 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CRYBB1P53674 252 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MLLT10P55197 1068 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 HERVK_113P63132 956 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 LASP1Q14847 261 aaKnown RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SLC9C1Q4G0N8 1177 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 LRRC38Q5VT99 294 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MFSD7Q6UXD7 560 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SEPT12Q8IYM1 358 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 NDNFQ8TB73 568 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ISOC1Q96CN7 298 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SLC7A6OSQ96CW6 309 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MED18Q9BUE0 208 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ADAP2Q9NPF8 381 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 NDOR1Q9UHB4 597 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 NRXN1Q9ULB1 1477 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CARMIL3Q8ND23 1372 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 EHBP1L1Q8N3D4 1523 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 A8MU76 341 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF487B1APH4 448 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 TISP43B9A030 160 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 B9A039 149 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SEC14L5O43304 696 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SIGLEC6O43699 453 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SNAP91O60641 907 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SCGB2A1O75556 95 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ACSL3O95573 720 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ACTR1BP42025 376 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PREPP48147 710 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 492.7 ms