RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TTC36A6NLP5 189 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 B4GALT3O60512 393 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 CNOT3O75175 753 aaKnown RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 HOXD9P28356 352 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 MAP2K4P45985 399 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 CDK5R2Q13319 367 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 DNASE1L3Q13609 305 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GTF2H2Q13888 395 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 PON2Q15165 354 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 TRIP4Q15650 581 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 MAPKAPK3Q16644 382 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 FAM110CQ1W6H9 321 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 SPANXN4Q5MJ08 99 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 C10orf120Q5SQS8 335 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 TMEM236Q5W0B7 351 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GDF6Q6KF10 455 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GTF2H2CQ6P1K8 395 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 FRA10AC1Q70Z53 315 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 DCP2Q8IU60 420 aaKnown RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 EFHBQ8N7U6 833 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 LPCAT1Q8NF37 534 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 OR5K1Q8NHB7 308 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 MCOLN3Q8TDD5 553 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GLMNQ92990 594 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 MGME1Q9BQP7 344 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 SACM1LQ9NTJ5 587 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 RNF181Q9P0P0 153 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 ERVK-18Q9QC07 812 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 RGS17Q9UGC6 210 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 COMMD10Q9Y6G5 202 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 HTR3EA5X5Y0 456 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 C2orf81A6NN90 581 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 IFRD1O00458 451 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 FFAR3O14843 346 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 BCKDKO14874 412 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GPR42O15529 346 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 NADKO95544 446 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 ANGPTL1O95841 491 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 PRLP01236 227 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 FTH1P02794 183 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 BMP4P12644 408 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 TYMPP19971 482 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 FMO3P31513 532 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 AKT1P31749 480 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 VBP1P61758 197 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 VAC14Q08AM6 782 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 TRAF3Q13114 568 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 INAQ16352 499 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 PAGE2BQ5JRK9 111 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GCNT7Q6ZNI0 430 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 GALNT5Q7Z7M9 940 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 ADHFE1Q8IWW8 467 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 C10orf111Q8N326 155 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 MFSD4AQ8N468 514 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 KRTCAP2Q8N6L1 136 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 VMP1Q96GC9 406 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF641Q96N77 438 aaPredicted RBP10.72□□□□□ -0.69
SNIP1-204ENST00000638725 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 FBXO44Q9H4M3 255 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 MAGEE1Q9HCI5 957 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 ZFP14Q9HCL3 533 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 SLC6A13Q9NSD5 602 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 NUDT4Q9NZJ9 180 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 PADI3Q9ULW8 664 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 CEP350Q5VT06 3117 aa10.72□□□□□ -0.69
SNIP1-204ENST00000638725 M0R3G1 203 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ARVCFO00192 962 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 MSH3P20585 1137 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 HOXD12P35452 270 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 MAPKAPK2P49137 400 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 HMGCS1Q01581 520 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PGS1Q32NB8 556 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ALG1LQ6GMV1 187 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 LAIR1Q6GTX8 287 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CCDC81Q6ZN84 652 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 DET1Q7L5Y6 550 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 MICU2Q8IYU8 434 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 LGI2Q8N0V4 545 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ARL10Q8N8L6 244 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 FBXO32Q969P5 355 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 ZBTB18Q99592 522 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 SPON2Q9BUD6 331 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 IPPKQ9H8X2 491 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 FARSBQ9NSD9 589 aaKnown RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 VNN3Q9NY84 501 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 INTS6Q9UL03 887 aaKnown RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 SLC45A1Q9Y2W3 748 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CCL27Q9Y4X3 112 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PCDHGC4Q9Y5F7 938 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PMF1-BGLAPU3KQ54 211 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 PRMT5O14744 637 aaPredicted RBP10.71□□□□□ -0.69
SNIP1-204ENST00000638725 KDM1AO60341 852 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 CREG1O75629 220 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 DNAJB5O75953 348 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 SCELO95171 688 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 GUCA1CO95843 209 aa10.71□□□□□ -0.69
SNIP1-204ENST00000638725 SERPINA1P01009 418 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms