RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PPP1R3BQ86XI6 285 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 ACVR1CQ8NER5 493 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 OR5AR1Q8NGP9 310 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 LCN9Q8WX39 176 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 TFGQ92734 400 aaPredicted RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 ARHGAP9Q9BRR9 750 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 VPS37BQ9H9H4 285 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 CROTQ9UKG9 612 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 POMT2Q9UKY4 750 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 PLAGL1Q9UM63 463 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 DRG1Q9Y295 367 aaKnown RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 COLEC10Q9Y6Z7 277 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 SLC9B1P1A6NJY1 282 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 BHMG1C9JSJ3 638 aaPredicted RBP17.22■□□□□ 0.35
PNKP-230ENST00000638016 IFRD1O00458 451 aaPredicted RBP17.22■□□□□ 0.35
PNKP-230ENST00000638016 AP2A2O94973 939 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 ITGB2P05107 769 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 TPBGLP0DKB5 382 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 PVRP15151 417 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 NDUFS1P28331 727 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 NMBRP28336 390 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 PRAMEP78395 509 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 IL11RAQ14626 422 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 ARMC6Q6NXE6 501 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 C6orf15Q6UXA7 325 aaPredicted RBP17.22■□□□□ 0.35
PNKP-230ENST00000638016 VRK3Q8IV63 474 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 KRT222Q8N1A0 295 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 ESX1Q8N693 406 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 LMNTD1Q8N9Z9 388 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 PPHLN1Q8NEY8 458 aaKnown RBP17.22■□□□□ 0.35
PNKP-230ENST00000638016 OR4L1Q8NH43 312 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 ZFPM2Q8WW38 1151 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 STARD8Q92502 1023 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 SLC45A3Q96JT2 553 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 TRIM56Q9BRZ2 755 aaKnown RBP17.22■□□□□ 0.35
PNKP-230ENST00000638016 SRMSQ9H3Y6 488 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 FGF21Q9NSA1 209 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 SYBUQ9NX95 663 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 ICKQ9UPZ9 632 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 HEBP2Q9Y5Z4 205 aa17.22■□□□□ 0.35
PNKP-230ENST00000638016 SLC5A10A0PJK1 596 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 TERTO14746 1132 aaKnown RBP17.21■□□□□ 0.35
PNKP-230ENST00000638016 NTRK1P04629 796 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 PLA2G2AP14555 144 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 MGAT1P26572 445 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 ACADLP28330 430 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 DLSTP36957 453 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 ARL4DP49703 201 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 CDC20Q12834 499 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 NFATC3Q12968 1075 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 ANKRD22Q5VYY1 191 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 C16orf46Q6P387 395 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 TRIM73Q86UV7 250 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 D2HGDHQ8N465 521 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 KIAA1143Q96AT1 154 aaPredicted RBP17.21■□□□□ 0.35
PNKP-230ENST00000638016 STAMBPL1Q96FJ0 436 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 CD180Q99467 661 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 AP1M1Q9BXS5 423 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 GRPEL1Q9HAV7 217 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 EIF2B3Q9NR50 452 aaKnown RBP17.21■□□□□ 0.35
PNKP-230ENST00000638016 TREX1Q9NSU2 369 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 SOHLH2Q9NX45 425 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 CIDEBQ9UHD4 219 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 RARRES3Q9UL19 164 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 RIMKLBQ9ULI2 386 aa17.21■□□□□ 0.35
PNKP-230ENST00000638016 ZNF891A8MT65 544 aaPredicted RBP17.2■□□□□ 0.34
PNKP-230ENST00000638016 ZIC2O95409 532 aaPredicted RBP17.2■□□□□ 0.34
PNKP-230ENST00000638016 FTH1P02794 183 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 F7P08709 466 aaPredicted RBP17.2■□□□□ 0.34
PNKP-230ENST00000638016 FURINP09958 794 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 ST6GAL1P15907 406 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 CDH3P22223 829 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 ARNTP27540 789 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 CCR7P32248 378 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 CD151P48509 253 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 HSD11B2P80365 405 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 RPA4Q13156 261 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 MAP7Q14244 749 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
PNKP-230ENST00000638016 FASTKD1Q53R41 847 aaKnown RBP17.2■□□□□ 0.34
PNKP-230ENST00000638016 PCID2Q5JVF3 399 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 FAM199XQ6PEV8 388 aaPredicted RBP17.2■□□□□ 0.34
PNKP-230ENST00000638016 TMEM135Q86UB9 458 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 SPNS2Q8IVW8 549 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 ADGRF3Q8IZF5 1079 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.2■□□□□ 0.34
PNKP-230ENST00000638016 ZNF501Q96CX3 271 aaPredicted RBP17.2■□□□□ 0.34
PNKP-230ENST00000638016 KCNF1Q9H3M0 494 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 PDE7BQ9NP56 450 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 ASF1AQ9Y294 204 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
PNKP-230ENST00000638016 GOLGA6L3A6NEY3 463 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 GOLGA8KD6RF30 607 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 GOLGA8TH3BQL2 631 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 LIN7AO14910 233 aaPredicted RBP17.19■□□□□ 0.34
PNKP-230ENST00000638016 AVILO75366 819 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 ZBTB11O95625 1053 aaPredicted RBP17.19■□□□□ 0.34
PNKP-230ENST00000638016 OR56A5P0C7T3 313 aa17.19■□□□□ 0.34
PNKP-230ENST00000638016 PRDX3P30048 256 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms