RNA–Protein interactions for RNA: ENST00000631315.1

SPTAN1-226, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-226ENST00000631315 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 FRG1Q14331 258 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 SNAP47Q5SQN1 464 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 TEDDM1Q5T9Z0 273 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 TMEM71Q6P5X7 295 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 ZNF574Q6ZN55 896 aaPredicted RBP12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 C3orf62Q6ZUJ4 267 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 TMPRSS9Q7Z410 1059 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 VRK3Q8IV63 474 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 CNTN4Q8IWV2 1026 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 SLC22A15Q8IZD6 547 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 ACVR1CQ8NER5 493 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 OR4E2Q8NGC2 313 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 CFAP61Q8NHU2 1237 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 LCN9Q8WX39 176 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 NXPE2Q96DL1 559 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 CMKLR1Q99788 373 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 HGH1Q9BTY7 390 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 NRSN2Q9GZP1 204 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 TRIT1Q9H3H1 467 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 AKAP7Q9P0M2 348 aaPredicted RBP12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 KLHL3Q9UH77 587 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 COMMD10Q9Y6G5 202 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 RP1P56715 2156 aa12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 ZFC3H1O60293 1989 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-226ENST00000631315 A8MU76 341 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 AHSGP02765 367 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 MPOP05164 745 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 ACADLP28330 430 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 CCKBRP32239 447 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 LIMK2P53671 638 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 CFHR1Q03591 330 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 C3orf38Q5JPI3 329 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 ARMC6Q6NXE6 501 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 IRGCQ6NXR0 463 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 ZNF549Q6P9A3 640 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 CEP128Q6ZU80 1094 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 SLITRK4Q8IW52 837 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 ZBTB2Q8N680 514 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 RCBTB1Q8NDN9 531 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 OR5AR1Q8NGP9 310 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 WDR36Q8NI36 951 aaKnown RBP12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 KCNJ9Q92806 393 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 ZDHHC12Q96GR4 267 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 C9orf72Q96LT7 481 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 CCDC74BQ96LY2 380 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 TGM7Q96PF1 710 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 NDNQ99608 321 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 FAM129AQ9BZQ8 928 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 SRMSQ9H3Y6 488 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 ZDHHC18Q9NUE0 388 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 MOCS1Q9NZB8 636 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 TMEM9Q9P0T7 183 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 TXNDC16Q9P2K2 825 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 SLC17A6Q9P2U8 582 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 GALPQ9UBC7 116 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 POLG2Q9UHN1 485 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 TSR3Q9UJK0 312 aaKnown RBP12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 SATB2Q9UPW6 733 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 CDYLQ9Y232 598 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 TDRKHQ9Y2W6 561 aaKnown RBP12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 SPEGQ15772 3267 aa12.79□□□□□ -0.36
SPTAN1-226ENST00000631315 CCDC187A0A096LP49 1063 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 OR6C74A6NCV1 312 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 C1QTNF9BB2RNN3 333 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 CAPN5O15484 640 aaPredicted RBP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 VPS26AO75436 327 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 RASSF9O75901 435 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 RPN2P04844 631 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 RHOXF2BP0C7M4 288 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 C1QTNF9P0C862 333 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 GABRB3P28472 473 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 ABCG1P45844 678 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 CAPZBP47756 277 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 GABREP78334 506 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 EIF3IQ13347 325 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 TRA2AQ13595 282 aaKnown RBP eCLIP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 TTLL9Q3SXZ7 439 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 UGT3A1Q6NUS8 523 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 TTC23LQ6PF05 361 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 RAB11FIP2Q7L804 512 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 TBC1D21Q8IYX1 336 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 FBXO39Q8N4B4 442 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 SIDT2Q8NBJ9 832 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 RSC1A1Q92681 617 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 CDKL2Q92772 493 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 GATA6Q92908 595 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 RHOXF2Q9BQY4 288 aa12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 AARSD1Q9BTE6 412 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-226ENST00000631315 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms