RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SEMA5BQ9P283 1151 aa13.91□□□□□ -0.18
CDK7-215ENST00000629350 MARCH4Q9P2E8 410 aaPredicted RBP13.91□□□□□ -0.18
CDK7-215ENST00000629350 EPHA6Q9UF33 1036 aa13.91□□□□□ -0.18
CDK7-215ENST00000629350 PCDHGA11Q9Y5H2 935 aa13.91□□□□□ -0.18
CDK7-215ENST00000629350 MED13Q9UHV7 2174 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 OR6C74A6NCV1 312 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 GOLGA6L9A6NEM1 432 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 POLR1CO15160 346 aaPredicted RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 OR1I1O60431 355 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 KIAA0754O94854 1291 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 IFNB1P01574 187 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 SLC35G4P0C7Q5 338 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 TPBGLP0DKB5 382 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 ATP1B2P14415 290 aaPredicted RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 NELFEP18615 380 aaKnown RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 RPL22P35268 128 aaKnown RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 CRADDP78560 199 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 PLCL1Q15111 1095 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 P3H1Q32P28 736 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 SEL1L2Q5TEA6 688 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 PRAMEF17Q5VTA0 474 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 CEACAM20Q6UY09 585 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 LDB1Q86U70 411 aaPredicted RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 TMEM135Q86UB9 458 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 NLGN4XQ8N0W4 816 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 RNF10Q8N5U6 811 aaKnown RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 PHC3Q8NDX5 983 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 NLGN4YQ8NFZ3 816 aaPredicted RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 MED8Q96G25 268 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 WBP1Q96G27 269 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 ULBP3Q9BZM4 244 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 KIR3DX1Q9H7L2 352 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 SMARCAL1Q9NZC9 954 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 DNMT3AQ9Y6K1 912 aaPredicted RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 UTP20O75691 2785 aaKnown RBP13.9□□□□□ -0.18
CDK7-215ENST00000629350 CCDC88CQ9P219 2028 aa13.9□□□□□ -0.18
CDK7-215ENST00000629350 PTPN13Q12923 2485 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 BTN3A3O00478 584 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 SUN1O94901 812 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
CDK7-215ENST00000629350 PVRP15151 417 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
CDK7-215ENST00000629350 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
CDK7-215ENST00000629350 CXCR5P32302 372 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 KCNJ1P48048 391 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 ATP1A2P50993 1020 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 SEMA5AQ13591 1074 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 GPR19Q15760 415 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 PWWP2BQ6NUJ5 590 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 TAS2R42Q7RTR8 314 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 RBM12BQ8IXT5 1001 aaKnown RBP13.89□□□□□ -0.19
CDK7-215ENST00000629350 ULK4Q96C45 1275 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 DCUN1D1Q96GG9 259 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 ZNF514Q96K75 400 aaPredicted RBP13.89□□□□□ -0.19
CDK7-215ENST00000629350 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 TRIM56Q9BRZ2 755 aaKnown RBP13.89□□□□□ -0.19
CDK7-215ENST00000629350 HGH1Q9BTY7 390 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 RAB33BQ9H082 229 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 CASS4Q9NQ75 786 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 CROTQ9UKG9 612 aa13.89□□□□□ -0.19
CDK7-215ENST00000629350 TCRBV7S3A2A0A539 114 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 KRT87PA6NCN2 255 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 BTN3A1O00481 513 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 HCRTR1O43613 425 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 KCNJ13O60928 360 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 GOT2P00505 430 aaKnown RBP13.88□□□□□ -0.19
CDK7-215ENST00000629350 CTSBP07858 339 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 FGF5P12034 268 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 HADHAP40939 763 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 CACNG1Q06432 222 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 NFATC3Q12968 1075 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 ABRQ12979 859 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 TUBB3Q13509 450 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 BRD3Q15059 726 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 COLEC12Q5KU26 742 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 DNTTIP2Q5QJE6 756 aaKnown RBP13.88□□□□□ -0.19
CDK7-215ENST00000629350 FAM69BQ5VUD6 431 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 TRIM73Q86UV7 250 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 SLC38A9Q8NBW4 561 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 OR5AR1Q8NGP9 310 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 STYXQ8WUJ0 223 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 HDAC10Q969S8 669 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 SLC45A3Q96JT2 553 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 TEFMQ96QE5 360 aaKnown RBP13.88□□□□□ -0.19
CDK7-215ENST00000629350 GPN2Q9H9Y4 310 aaPredicted RBP13.88□□□□□ -0.19
CDK7-215ENST00000629350 HRASLS2Q9NWW9 162 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 FEZ2Q9UHY8 353 aaPredicted RBP13.88□□□□□ -0.19
CDK7-215ENST00000629350 LNPEPQ9UIQ6 1025 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 ICKQ9UPZ9 632 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 ZNF148Q9UQR1 794 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
CDK7-215ENST00000629350 TLCD2A6NGC4 264 aa13.87□□□□□ -0.19
CDK7-215ENST00000629350 MEN1O00255 615 aa13.87□□□□□ -0.19
CDK7-215ENST00000629350 TOX3O15405 576 aaPredicted RBP13.87□□□□□ -0.19
CDK7-215ENST00000629350 SPAG6O75602 509 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms