RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 GPC4O75487 556 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 RASSF9O75901 435 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 TTC4O95801 387 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 AOAHP28039 575 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 LEPRP48357 1165 aaKnown RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 ADARP55265 1226 aaKnown RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 RAB15P59190 212 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 HSPA14Q0VDF9 509 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 LONRF1Q17RB8 773 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 TYSND1Q2T9J0 566 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 DCAF12Q5T6F0 453 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 NAPRTQ6XQN6 538 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 OOSP2Q86WS3 158 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 FAM129CQ86XR2 697 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 CILP2Q8IUL8 1156 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 TBC1D21Q8IYX1 336 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 JPH3Q8WXH2 748 aaPredicted RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 KLHL6Q8WZ60 621 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 ART4Q93070 314 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 EBNA1BP2Q99848 306 aaKnown RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 SRMSQ9H3Y6 488 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 SEMA5BQ9P283 1151 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 ASF1AQ9Y294 204 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 OR6C74A6NCV1 312 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 FAM187AA6NFU0 413 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 EFCAB8A8MWE9 144 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 C9orf172C9J069 976 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ZZEF1O43149 2961 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 SLCO2B1O94956 709 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 S1PR4O95977 384 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ESR1P03372 595 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 PGAM1P18669 254 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ITPKBP27987 946 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 FMO4P31512 558 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ABCG1P45844 678 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 EIF3BP55884 814 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 DHX9Q08211 1270 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 PRKAA1Q13131 559 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 PRKG2Q13237 762 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 TMED2Q15363 201 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 BROXQ5VW32 411 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 HIBCHQ6NVY1 386 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 C19orf48Q6RUI8 117 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 FAM92BQ6ZTR7 304 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 CENPUQ71F23 418 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 PRSS42Q7Z5A4 293 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 SPACA3Q8IXA5 215 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 SLC22A15Q8IZD6 547 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 KRT222Q8N1A0 295 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 AGGF1Q8N302 714 aaeCLIP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 GABPB2Q8TAK5 448 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 GSDMBQ8TAX9 411 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 UBXN4Q92575 508 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 LPGAT1Q92604 370 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 SNF8Q96H20 258 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 BIRC8Q96P09 236 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 TEFMQ96QE5 360 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 CD180Q99467 661 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 TRIM56Q9BRZ2 755 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ZPBPQ9BS86 351 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 DDA1Q9BW61 102 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 TRIT1Q9H3H1 467 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ZNF768Q9H5H4 540 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 C20orf96Q9NUD7 363 aaPredicted RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 INTS10Q9NVR2 710 aaKnown RBP16.29■□□□□ 0.2
UBE3D-208ENST00000626828 CRYL1Q9Y2S2 319 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 ADAMTS20P59510 1910 aa16.29■□□□□ 0.2
UBE3D-208ENST00000626828 MATN2O00339 956 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 KLK10O43240 276 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 KDM1AO60341 852 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 KRT37O76014 449 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 TUBB4AP04350 444 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 SEPHS1P49903 392 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 ITGA8P53708 1063 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 CSE1LP55060 971 aaKnown RBP16.28■□□□□ 0.2
UBE3D-208ENST00000626828 BBS9Q3SYG4 887 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 PLEKHS1Q5SXH7 462 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 CEACAM20Q6UY09 585 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 OTOAQ7RTW8 1153 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 CARFQ8N187 725 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 BMPERQ8N8U9 685 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBE3D-208ENST00000626828 OR52E1Q8NGJ3 308 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 LRRC39Q96DD0 335 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 TRIM51Q9BSJ1 452 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 TRIM31Q9BZY9 425 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 LATS2Q9NRM7 1088 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 CDYLQ9Y232 598 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 PCDHB11Q9Y5F2 797 aa16.28■□□□□ 0.2
UBE3D-208ENST00000626828 SEC16AO15027 2179 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 POLR1CO15160 346 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-208ENST00000626828 SEC31AO94979 1220 aaKnown RBP16.27■□□□□ 0.2
UBE3D-208ENST00000626828 RPN2P04844 631 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 PKMP14618 531 aaKnown RBP16.27■□□□□ 0.2
UBE3D-208ENST00000626828 NELFEP18615 380 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms