RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NDUFAF1Q9Y375 327 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 MFHAS1Q9Y4C4 1052 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 HES2Q9Y543 173 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CSNK1G3Q9Y6M4 447 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 BBIP1A8MTZ0 92 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 F8W036 122 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 NFKBIEO00221 500 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 RGS10O43665 173 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PDE9AO76083 593 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 HPRP00739 348 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 MT-ND2P03891 347 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 SAT1P21673 171 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 FMO3P31513 532 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 RFX2P48378 723 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 GBX2P52951 348 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 JAG1P78504 1218 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PCDH1Q08174 1060 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 ZNF273Q14593 569 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SSPNQ14714 243 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 GPR68Q15743 365 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 ZNF124Q15973 351 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PAMR1Q6UXH9 720 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 ZNF527Q8NB42 609 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 RDH11Q8TC12 318 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SPPL2BQ8TCT7 592 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SLC2A13Q96QE2 648 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SPNS1Q9H2V7 528 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 COL20A1Q9P218 1284 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 ADAM28Q9UKQ2 775 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 OGDHLQ9ULD0 1010 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 STAP1Q9ULZ2 295 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 AGRPO00253 132 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PRMT5O14744 637 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 APOL1O14791 398 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 WDR47O94967 919 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 APOC1P02654 83 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PTX3P26022 381 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 GLRBP48167 497 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 VEGFBP49765 207 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CDH6P55285 790 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CYP4F2P78329 520 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SLC25A11Q02978 314 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 CYP4F3Q08477 520 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CDK5R2Q13319 367 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 AAK1Q2M2I8 961 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PRPF38BQ5VTL8 546 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 ZNF470Q6ECI4 717 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 C8orf82Q6P1X6 216 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 RBM23Q86U06 439 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 CDAN1Q8IWY9 1227 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CDH26Q8IXH8 852 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 VWA5B2Q8N398 1253 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 NIPA2Q8N8Q9 360 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 KDM1BQ8NB78 822 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PAPD5Q8NDF8 572 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 OR52H1Q8NGJ2 320 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 HMGCLL1Q8TB92 370 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SYTL5Q8TDW5 730 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 LRCH3Q96II8 777 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 HSD17B14Q9BPX1 270 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 TTLL2Q9BWV7 592 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CAB39LQ9H9S4 337 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CMTM6Q9NX76 183 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 TSR3Q9UJK0 312 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 ZNF112Q9UJU3 913 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 C3orf18Q9UK00 162 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 VAV3Q9UKW4 847 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 BAIAP2Q9UQB8 552 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 TRBV23OR9-2A0A075B6M9 112 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 HS6ST1O60243 411 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 WDPCPO95876 746 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 MT-CO1P00395 513 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 SELLP14151 372 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 PIGAP37287 484 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 CTSKP43235 329 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 BRCC3P46736 316 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 MAP2K6P52564 334 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 FCGRTP55899 365 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 ISL1P61371 349 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 CSNK2BP67870 215 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 PLIN5Q00G26 463 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 SCN1BQ07699 218 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 MAB21L1Q13394 359 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 SEMA5AQ13591 1074 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 DACT2Q5SW24 774 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 JADE1Q6IE81 842 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 C1orf122Q6ZSJ8 110 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 GPAT4Q86UL3 456 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 ZNF680Q8NEM1 530 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 ENKURQ8TC29 256 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 RNF139Q8WU17 664 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 PTP4A1Q93096 173 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 CDCA5Q96FF9 252 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 HYLS1Q96M11 299 aa7.78□□□□□ -1.16
VPS11-209ENST00000622309 DCLRE1CQ96SD1 692 aaKnown RBP7.78□□□□□ -1.16
VPS11-209ENST00000622309 ITPAQ9BY32 194 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms