RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 MT-CYBP00156 380 aaPredicted RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 POLR2IP36954 125 aaKnown RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 NR2C2P49116 596 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 GPSM1Q86YR5 675 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 TMEM132CQ8N3T6 1108 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 VMP1Q96GC9 406 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 CDK15Q96Q40 435 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 ACO2Q99798 780 aaKnown RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 SORBS1Q9BX66 1292 aaKnown RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 MKLN1Q9UL63 735 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 PRSS51A0A1B0GVH4 220 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 B8ZZF3 427 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 UBXN8O00124 270 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 ZBTB24O43167 697 aaPredicted RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 YBX3P16989 372 aaKnown RBP eCLIP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 TGFBR1P36897 503 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 CRATP43155 626 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 HARS2P49590 506 aaKnown RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 CSTF1Q05048 431 aaKnown RBP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
SYNRG-229ENST00000621136 ZNF181Q2M3W8 571 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 FAM122CQ6P4D5 195 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 TMEM126BQ8IUX1 230 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 HID1Q8IV36 788 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 OR56A4Q8NGH8 313 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 PTERQ96BW5 349 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 SLC2A11Q9BYW1 496 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 MOCS1Q9NZB8 636 aa12.3□□□□□ -0.44
SYNRG-229ENST00000621136 ARVCFO00192 962 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 SLC1A7O00341 560 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 KPNA6O60684 536 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 SLITRK5O94991 958 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 RASAL1O95294 804 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 ASPAP45381 313 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 EFNA5P52803 228 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 GEMP55040 296 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 OLR1P78380 273 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 BTBD8Q5XKL5 378 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 C11orf96Q7Z7L8 435 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 GLB1L3Q8NCI6 653 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 ROPN1LQ96C74 230 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 C2orf49Q9BVC5 232 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 GTPBP2Q9BX10 602 aaKnown RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 POLR2J2Q9GZM3 115 aaKnown RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 MAPRE3Q9UPY8 281 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 RIPK3Q9Y572 518 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 PCDHGA11Q9Y5H2 935 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 MEIOCA2RUB1 952 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 BBIP1A8MTZ0 92 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 STBD1O95210 358 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 GADD45AP24522 165 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 HIST2H2ACQ16777 129 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 RUNDC3AQ59EK9 446 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 MSANTD2Q6P1R3 559 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 FEM1CQ96JP0 617 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 PPP1R2P1Q96PQ5 205 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 PDCD10Q9BUL8 212 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 YTHDF1Q9BYJ9 559 aaKnown RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 TRPM5Q9NZQ8 1165 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 HCN3Q9P1Z3 774 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 CTDSP2O14595 271 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 RLN1P04808 185 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 DCKP27707 260 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 CRTC2Q53ET0 693 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 CLVS2Q5SYC1 327 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 NDUFAF5Q5TEU4 345 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 ZNF549Q6P9A3 640 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 ZNF438Q7Z4V0 828 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 TBL1YQ9BQ87 522 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 TUBA1CQ9BQE3 449 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 AIFM2Q9BRQ8 373 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 KIAA1522Q9P206 1035 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-229ENST00000621136 DNAJB9Q9UBS3 223 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 CFL2Q9Y281 166 aa12.29□□□□□ -0.44
SYNRG-229ENST00000621136 CYP2C18P33260 490 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 GJA9P57773 515 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 UFM1P61960 85 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 CXorf57Q6NSI4 855 aaKnown RBP12.28□□□□□ -0.44
SYNRG-229ENST00000621136 WDR49Q8IV35 697 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 TMEM102Q8N9M5 508 aaPredicted RBP12.28□□□□□ -0.44
SYNRG-229ENST00000621136 CSPG4P5Q96PW8 444 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 LTB4R2Q9NPC1 389 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 VPS26AO75436 327 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 SERPIND1P05546 499 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 UMPSP11172 480 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 CDH5P33151 784 aaPredicted RBP12.28□□□□□ -0.44
SYNRG-229ENST00000621136 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
SYNRG-229ENST00000621136 TIFABQ6ZNK6 161 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 SPNS2Q8IVW8 549 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 ZNF567Q8N184 647 aa12.28□□□□□ -0.44
SYNRG-229ENST00000621136 TMEM151AQ8N4L1 468 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms