RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CD151P48509 253 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 POLE2P56282 527 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 CCZ1BP86790 482 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 CCZ1P86791 482 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-203ENST00000620514 PRKAA1Q13131 559 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 RPA4Q13156 261 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 PRKG2Q13237 762 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 BOP1Q14137 746 aaKnown RBP16.68■□□□□ 0.26
HMGN3-203ENST00000620514 SEMA3AQ14563 771 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 CCNG2Q16589 344 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 DEFB109BQ30KR1 87 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 PACS1Q6VY07 963 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 ZNF534Q76KX8 674 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 OR52E1Q8NGJ3 308 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 TFGQ92734 400 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-203ENST00000620514 CATSPER2Q96P56 530 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 RANBP9Q96S59 729 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 TLR10Q9BXR5 811 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 AKIRIN1Q9H9L7 192 aaPredicted RBP16.68■□□□□ 0.26
HMGN3-203ENST00000620514 SOHLH2Q9NX45 425 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 POMT2Q9UKY4 750 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 TCAF1Q9Y4C2 921 aa16.68■□□□□ 0.26
HMGN3-203ENST00000620514 GSAPA4D1B5 854 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 SLC9B1P1A6NJY1 282 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 J3QKU1 62 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 SLC28A2O43868 658 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 KATNA1O75449 491 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 FGGP02679 453 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 CCNYL3P0C7X3 344 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 CDH3P22223 829 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 CCR10P46092 362 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 KCNJ1P48048 391 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 ACVR1Q04771 509 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 CYB5D1Q6P9G0 228 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 ZNF449Q6P9G9 518 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 AFTPHQ6ULP2 937 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 PRICKLE2Q7Z3G6 844 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 OR5AR1Q8NGP9 310 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 OR6P1Q8NGX9 317 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 CT55Q8WUE5 264 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 ELMO1Q92556 727 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 ZNF501Q96CX3 271 aaPredicted RBP16.67■□□□□ 0.26
HMGN3-203ENST00000620514 RUFY1Q96T51 708 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 TFB2MQ9H5Q4 396 aaKnown RBP16.67■□□□□ 0.26
HMGN3-203ENST00000620514 MVB12BQ9H7P6 319 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 LHX9Q9NQ69 397 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 PADI1Q9ULC6 663 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 RIMKLBQ9ULI2 386 aa16.67■□□□□ 0.26
HMGN3-203ENST00000620514 LIN7AO14910 233 aaPredicted RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 FTH1P02794 183 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 GSTM1P09488 218 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 FURINP09958 794 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 SFTPCP11686 197 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 ACADLP28330 430 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 PRDX3P30048 256 aaKnown RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 CXCR5P32302 372 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 SESN2P58004 480 aaPredicted RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 TUBB4BP68371 445 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 MC1RQ01726 317 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 GSTM4Q03013 218 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 KCNAB2Q13303 367 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 DNASE1L3Q13609 305 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 LAMB3Q13751 1172 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 TUBB2AQ13885 445 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 PRAMEF17Q5VTA0 474 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 FAM199XQ6PEV8 388 aaPredicted RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 DRICH1Q6PGQ1 229 aaPredicted RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 OR4L1Q8NH43 312 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 FCRL4Q96PJ5 515 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 TUBB2BQ9BVA1 445 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 KLHL25Q9H0H3 589 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 SLC25A18Q9H1K4 315 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 ADNPQ9H2P0 1102 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 C1GALT1Q9NS00 363 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 ICKQ9UPZ9 632 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 DRG1Q9Y295 367 aaKnown RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 BTRCQ9Y297 605 aa16.66■□□□□ 0.26
HMGN3-203ENST00000620514 HEMK1Q9Y5R4 338 aaPredicted RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 TLN1Q9Y490 2541 aaKnown RBP16.66■□□□□ 0.26
HMGN3-203ENST00000620514 SLC5A10A0PJK1 596 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 BHMG1C9JSJ3 638 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 QSOX1O00391 747 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 CEP104O60308 925 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 MT-ND3P03897 115 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 OR56A5P0C7T3 313 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 PVRP15151 417 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 ST6GAL1P15907 406 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 CSE1LP55060 971 aaKnown RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 CRADDP78560 199 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 BASP1P80723 227 aaKnown RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 ERV3-1Q14264 604 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 CRTC2Q53ET0 693 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 TMTC4Q5T4D3 741 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 LYPLAL1Q5VWZ2 237 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 LDB1Q86U70 411 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 TMEM135Q86UB9 458 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 BPHLQ86WA6 291 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 AMIGO1Q86WK6 493 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms