RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RNF11Q9Y3C5 154 aa7.64□□□□□ -1.19
NEK3-207ENST00000617054 A0A088AWK7 358 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 CXorf51AA0A1B0GTR3 108 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 RAD51BO15315 384 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 LATO43561 262 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 KLK8O60259 260 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 SH3BGRLO75368 114 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 RNASEH2AO75792 299 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 PCCBP05166 539 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 NUDT7P0C024 238 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 VCLP18206 1134 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ITGB7P26010 798 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 SOX11P35716 441 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 GRIA2P42262 883 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 PKNOX1P55347 436 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TSTA3Q13630 321 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 CYLC2Q14093 348 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 SNCBQ16143 134 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 KANK2Q63ZY3 851 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 IL27RAQ6UWB1 636 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TRAPPC5Q8IUR0 188 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 CFAP206Q8IYR0 622 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ULK2Q8IYT8 1036 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 C2orf73Q8N5S3 287 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 TRAM1L1Q8N609 369 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 METTL6Q8TCB7 284 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ZNF483Q8TF39 744 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 ELSPBP1Q96BH3 223 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 PDLIM5Q96HC4 596 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 PANX3Q96QZ0 392 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TACO1Q9BSH4 297 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 TUBB6Q9BUF5 446 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ZSCAN5AQ9BUG6 496 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 KCTD5Q9NXV2 234 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 DKK3Q9UBP4 350 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 SLC7A8Q9UHI5 535 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 PTBP2Q9UKA9 531 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 OR1A2Q9Y585 309 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 MTCH2Q9Y6C9 303 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TSPAN11A1L157 253 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 AREL1O15033 823 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ESRRBO95718 433 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 EGFP01133 1207 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 APODP05090 189 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 CD9P21926 228 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 DPP6P42658 865 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 NEK2P51955 445 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TAS2R38P59533 333 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ABRAXAS2Q15018 415 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 EIF4HQ15056 248 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 CPSF6Q16630 551 aaKnown RBP eCLIP7.63□□□□□ -1.19
NEK3-207ENST00000617054 METTL21CQ5VZV1 264 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 FAM91A1Q658Y4 838 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 GPRIN3Q6ZVF9 776 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 SCUBE1Q8IWY4 988 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 HDDC3Q8N4P3 179 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TMIEQ8NEW7 156 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 UCMAQ8WVF2 138 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 NUS1Q96E22 293 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 DTD2Q96FN9 168 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 LRIG1Q96JA1 1093 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 SPACA7Q96KW9 195 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 COQ10AQ96MF6 247 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TRMOQ9BU70 441 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 FZD3Q9NPG1 666 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 MBNL1Q9NR56 388 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 SLC22A14Q9Y267 594 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 OARD1Q9Y530 152 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ANGPTL3Q9Y5C1 460 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 CFAP20Q9Y6A4 193 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 ZNF106Q9H2Y7 1883 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 LOC730098B7Z3J9 87 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 STX16O14662 325 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 GIPC1O14908 333 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 MAGEC1O60732 1142 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 S100BP04271 92 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 FGF4P08620 206 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 GGT5P36269 586 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 HK2P52789 917 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 PLIN5Q00G26 463 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 HMGCS1Q01581 520 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TFF2Q03403 129 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 GALNT1Q10472 559 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 COL9A2Q14055 689 aaPredicted RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 FASTKQ14296 549 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 TTLL9Q3SXZ7 439 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 PIP5KL1Q5T9C9 394 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 FLCNQ8NFG4 579 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 OR56A4Q8NGH8 313 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 ZNF385DQ9H6B1 395 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 OBP2AQ9NY56 170 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
NEK3-207ENST00000617054 ATXN10Q9UBB4 475 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 PSMD13Q9UNM6 376 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 CFAP54Q96N23 3096 aa7.63□□□□□ -1.19
NEK3-207ENST00000617054 TICRRQ7Z2Z1 1910 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 PSMD12O00232 456 aaPredicted RBP7.62□□□□□ -1.19
NEK3-207ENST00000617054 KRT36O76013 467 aa7.62□□□□□ -1.19
NEK3-207ENST00000617054 PAPLNO95428 1278 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms