RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 RP1L1Q8IWN7 2480 aaPredicted RBP18.47■□□□□ 0.55
CDX1-202ENST00000616154 TNRC6AQ8NDV7 1962 aaKnown RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 SPTBP11277 2137 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 MED13Q9UHV7 2174 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 ERI2A8K979 691 aaKnown RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 H7C0S8 307 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 PSMD3O43242 534 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 CPNE3O75131 537 aaKnown RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 SRP72O76094 671 aaKnown RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 ZBTB11O95625 1053 aaPredicted RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 NTRK1P04629 796 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 PTPN4P29074 926 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 TUBB4BP68371 445 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 SEMA5AQ13591 1074 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 LAMB3Q13751 1172 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 TUBB2AQ13885 445 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 SIX1Q15475 284 aaPredicted RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 UGT8Q16880 541 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 DUS1LQ6P1R4 473 aaKnown RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 DRICH1Q6PGQ1 229 aaPredicted RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 OR8K5Q8NH50 307 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 LINC00615Q96LM1 132 aaPredicted RBP18.46■□□□□ 0.55
CDX1-202ENST00000616154 C12orf66Q96MD2 445 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 RUFY1Q96T51 708 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 TUBB2BQ9BVA1 445 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 KIR3DX1Q9H7L2 352 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 SLC24A2Q9UI40 661 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 FKBPLQ9UIM3 349 aa18.46■□□□□ 0.55
CDX1-202ENST00000616154 SLC35G4P0C7Q5 338 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 TCP1P17987 556 aaKnown RBP18.45■□□□□ 0.54
CDX1-202ENST00000616154 CASQ1P31415 396 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 HADHAP40939 763 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 FAM199XQ6PEV8 388 aaPredicted RBP18.45■□□□□ 0.54
CDX1-202ENST00000616154 SYVN1Q86TM6 617 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
CDX1-202ENST00000616154 OR13C4Q8NGS5 318 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 THAP4Q8WY91 577 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 ZNF501Q96CX3 271 aaPredicted RBP18.45■□□□□ 0.54
CDX1-202ENST00000616154 RMDN2Q96LZ7 410 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 OSBPL9Q96SU4 736 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 ASB8Q9H765 288 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 BTRCQ9Y297 605 aa18.45■□□□□ 0.54
CDX1-202ENST00000616154 TRBV5-4A0A0C4DH59 114 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 OR6C74A6NCV1 312 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 SGTAO43765 313 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 SCRG1O75711 98 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 DNAJB5O75953 348 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 SUN1O94901 812 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 PDGFAP04085 211 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 KPNA2P52292 529 aaKnown RBP18.44■□□□□ 0.54
CDX1-202ENST00000616154 RPS18P62269 152 aaKnown RBP18.44■□□□□ 0.54
CDX1-202ENST00000616154 RPS15P62841 145 aaKnown RBP18.44■□□□□ 0.54
CDX1-202ENST00000616154 SPARCL1Q14515 664 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 GPR19Q15760 415 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 TMTC4Q5T4D3 741 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 ARMC6Q6NXE6 501 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 ZNF517Q6ZMY9 492 aaPredicted RBP18.44■□□□□ 0.54
CDX1-202ENST00000616154 ATCAYQ86WG3 371 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 TMEM126BQ8IUX1 230 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 RASGEF1CQ8N431 466 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 FAM26EQ8N5C1 309 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 ULK4Q96C45 1275 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 PBKQ96KB5 322 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 TRIM55Q9BYV6 548 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 LATS2Q9NRM7 1088 aa18.44■□□□□ 0.54
CDX1-202ENST00000616154 TTC7AQ9ULT0 858 aaPredicted RBP18.44■□□□□ 0.54
CDX1-202ENST00000616154 SPTBN1Q01082 2364 aaKnown RBP18.44■□□□□ 0.54
CDX1-202ENST00000616154 PIKFYVEQ9Y2I7 2098 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 SEC16AO15027 2179 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 IGLV3-16A0A075B6K0 115 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 NDUFS1P28331 727 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 GPS2Q13227 327 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 CCNG2Q16589 344 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 GPR33Q49SQ1 333 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 CAPRIN2Q6IMN6 1127 aaKnown RBP18.43■□□□□ 0.54
CDX1-202ENST00000616154 SNX20Q7Z614 316 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 LINC00523Q86TU6 105 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 NAT14Q8WUY8 206 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 LRFN5Q96NI6 719 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 CCM2Q9BSQ5 444 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 NLE1Q9NVX2 485 aaPredicted RBP18.43■□□□□ 0.54
CDX1-202ENST00000616154 FAM8A1Q9UBU6 413 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 SAR1BQ9Y6B6 198 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 COLEC10Q9Y6Z7 277 aa18.43■□□□□ 0.54
CDX1-202ENST00000616154 MROH6A6NGR9 719 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 RALBP11234 206 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 FDFT1P37268 417 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 PRLHRP49683 370 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 MLLT10P55197 1068 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 IL10RAQ13651 578 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 IZUMO3Q5VZ72 239 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 CFAP206Q8IYR0 622 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 NXPE1Q8N323 547 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 KIF18AQ8NI77 898 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 HM13Q8TCT9 377 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 COG1Q8WTW3 980 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 HEXDCQ8WVB3 486 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 MR1Q95460 341 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 DCUN1D1Q96GG9 259 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 SOHLH2Q9NX45 425 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms