RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 HEXDCQ8WVB3 486 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 INPP5DQ92835 1189 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 RBBP8Q99708 897 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 TUBB6Q9BUF5 446 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 BOCQ9BWV1 1114 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 CAAP1Q9H8G2 361 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 MRM3Q9HC36 420 aaKnown RBP8.68□□□□□ -1.02
SMAD4-217ENST00000611848 KCNK4Q9NYG8 393 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 ZNHIT2Q9UHR6 403 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 ZFP69BQ9UJL9 534 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
SMAD4-217ENST00000611848 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 HGSO14964 777 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 MTX2O75431 263 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 ATP6V1G2O95670 118 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 TOP3BO95985 862 aaKnown RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 PROCP04070 461 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 KRT16P08779 473 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 RALBP11234 206 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CDK4P11802 303 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CKMT1AP12532 417 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CKMT2P17540 419 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 MSH3P20585 1137 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 RPIAP49247 311 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 SERPINB8P50452 374 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CSRP3P50461 194 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 ARSDP51689 593 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 SIM1P81133 766 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 DAB2P98082 770 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CTBSQ01459 385 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CACNG1Q06432 222 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 ILKQ13418 452 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 SNCBQ16143 134 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 TAF1BQ53T94 588 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 ZNF648Q5T619 568 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 N4BP2L1Q5TBK1 243 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 AFTPHQ6ULP2 937 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 STRA8Q7Z7C7 330 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 LRRTM4Q86VH4 590 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 NXPE1Q8N323 547 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 FAM46DQ8NEK8 389 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 OR13J1Q8NGT2 312 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CCL4L1Q8NHW4 92 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 SLC7A6OSQ96CW6 309 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 MFSD3Q96ES6 412 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 ZNF514Q96K75 400 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 APOLD1Q96LR9 279 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 TMEM120AQ9BXJ8 343 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 SUDS3Q9H7L9 328 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 CHRAC1Q9NRG0 131 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 SNX15Q9NRS6 342 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 THAP1Q9NVV9 213 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 NSMCE4AQ9NXX6 385 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 IL1RAPL1Q9NZN1 696 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 TXNDC16Q9P2K2 825 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 HEY2Q9UBP5 337 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 LNPEPQ9UIQ6 1025 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 GPR34Q9UPC5 381 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 APOBEC2Q9Y235 224 aaKnown RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 PCDHGA1Q9Y5H4 931 aa8.67□□□□□ -1.02
SMAD4-217ENST00000611848 DNMT3AQ9Y6K1 912 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-217ENST00000611848 A0A0G2JND7 137 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 SPAARA0A1B0GVQ0 90 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CCDC78A2IDD5 438 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CCL22O00626 93 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 KMOO15229 486 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 GPR39O43194 453 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 KCNJ13O60928 360 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 MPOP05164 745 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 MYL2P10916 166 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 FGF3P11487 239 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ACP1P24666 158 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 AK4P27144 223 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 NMBRP28336 390 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TYK2P29597 1187 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 AKT1P31749 480 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 PPARGP37231 505 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ACTR1BP42025 376 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 RASSF2P50749 326 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CLCNKAP51800 687 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ACTR1AP61163 376 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 PRAMEP78395 509 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 STX3Q13277 289 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 KRT72Q14CN4 511 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TCEA2Q15560 299 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CCDC153Q494R4 210 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 KHDC1Q4VXA5 237 aaKnown RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 FASTKD1Q53R41 847 aaKnown RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 HSP90AA5PQ58FG0 334 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ZRANB3Q5FWF4 1079 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 LYPLAL1Q5VWZ2 237 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 C16orf46Q6P387 395 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 OGFOD3Q6PK18 319 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CHST15Q7LFX5 561 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TAS2R42Q7RTR8 314 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ERMP1Q7Z2K6 904 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CCDC91Q7Z6B0 441 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms