RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 GOLGA7Q7Z5G4 137 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TMEM173Q86WV6 379 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 SLC44A2Q8IWA5 706 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 TCEAL8Q8IYN2 117 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 GPR156Q8NFN8 814 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 MDGA1Q8NFP4 955 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 EZH1Q92800 747 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 SCAMP4Q969E2 229 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ITCHQ96J02 903 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PKMYT1Q99640 499 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 MIEF1Q9NQG6 463 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 RHBDL2Q9NX52 303 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ZDHHC3Q9NYG2 299 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 DNAJB9Q9UBS3 223 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 DPP7Q9UHL4 492 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 MYO18AQ92614 2054 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 GNRH1P01148 92 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SERPIND1P05546 499 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ABCB1P08183 1280 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 ZDHHC11BP0C7U3 371 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CAPGP40121 348 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CSTF3Q12996 717 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 SEMA3AQ14563 771 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PAGE2BQ5JRK9 111 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 KANK2Q63ZY3 851 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 BORAQ6PGQ7 559 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 FUNDC1Q8IVP5 155 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 LIX1Q8N485 282 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 APOL4Q9BPW4 351 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SAMHD1Q9Y3Z3 626 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 EBLN1P0CF75 366 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 RFC2P35250 354 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 GSSP48637 474 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 IDH2P48735 452 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 CYP4F3Q08477 520 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 LRRC73Q5JTD7 316 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CCNYL2Q5T2Q4 361 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 AFMIDQ63HM1 303 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 LCN8Q6JVE9 175 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 DPY19L3Q6ZPD9 716 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PATL1Q86TB9 770 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 RGL4Q8IZJ4 473 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TMEM151AQ8N4L1 468 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ARL10Q8N8L6 244 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 HEPHQ9BQS7 1158 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CLSTN3Q9BQT9 956 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CRISPLD1Q9H336 500 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ZNF696Q9H7X3 374 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 URB1O60287 2271 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 MANBAO00462 879 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CXCR6O00574 342 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TEX28O15482 410 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 AP1G1O43747 822 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PRLP01236 227 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ALDOCP09972 364 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 ELFN1P0C7U0 828 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PIM1P11309 404 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 DDX5P17844 614 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 TM4SF4P48230 202 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TUBA4AP68366 448 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 LSAMPQ13449 338 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 KCTD21Q4G0X4 260 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PDCD4Q53EL6 469 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 FRG2Q64ET8 278 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 C22orf39Q6P5X5 142 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TMEM207Q6UWW9 146 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 NUDT18Q6ZVK8 323 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 Q6ZVU0 165 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 OTOP2Q7RTS6 562 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 OR9Q1Q8NGQ5 310 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 REPS1Q96D71 796 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ZNF419Q96HQ0 510 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 FRG2BQ96QU4 278 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ROGDIQ9GZN7 287 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 EXOSC4Q9NPD3 245 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 RPS6KA6Q9UK32 745 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SAMD4AQ9UPU9 718 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 ANKRD31Q8N7Z5 1873 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 H3BM21 787 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SOCS5O75159 536 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 GJB3O75712 270 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ANXA4P09525 319 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 POU1F1P28069 291 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 HNF4AP41235 474 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CDKL1Q00532 357 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RAB33AQ14088 237 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 RCAN2Q14206 197 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 CYP2A13Q16696 494 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 LRRC66Q68CR7 880 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 HIPK1Q86Z02 1210 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 MTERF1Q99551 399 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 ATAD3AQ9NVI7 634 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 COL11A2P13942 1736 aaPredicted RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 LTBP1Q14766 1721 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 FXYD1O00168 92 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SMAD6O43541 496 aaKnown RBP6.25□□□□□ -1.41
SNX13-213ENST00000611725 CDH1P12830 882 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 PPIBP23284 216 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms