RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 PPIL6Q8IXY8 311 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 ZSCAN1Q8NBB4 408 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 OR8K5Q8NH50 307 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 LCN9Q8WX39 176 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 NAPGQ99747 312 aaPredicted RBP23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 SRMSQ9H3Y6 488 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 C1GALT1Q9NS00 363 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 SYBUQ9NX95 663 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 FAM8A1Q9UBU6 413 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 GNPTGQ9UJJ9 305 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 PILRAQ9UKJ1 303 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 SAR1BQ9Y6B6 198 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 SDK2Q58EX2 2172 aa23.11■■□□□ 1.29
SSX2IP-209ENST00000603677 TCRBV7S3A2A0A539 114 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 UBA6A0AVT1 1052 aaPredicted RBP23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 ERVH48-1M5A8F1 160 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 NDUFS3O75489 264 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 ZBTB11O95625 1053 aaPredicted RBP23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 APOA4P06727 396 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 FGF5P12034 268 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 NMBRP28336 390 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 PDHA2P29803 388 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 VPS41P49754 854 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 TRIP13Q15645 432 aaPredicted RBP23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 TMEM135Q86UB9 458 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 NAT8LQ8N9F0 302 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 OR5K2Q8NHB8 316 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 NKD1Q969G9 470 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 PDE7BQ9NP56 450 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 IGSF10Q6WRI0 2623 aa23.1■■□□□ 1.29
SSX2IP-209ENST00000603677 CTAGE9A4FU28 777 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 MAP3K7O43318 606 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 OR1I1O60431 355 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 GPC4O75487 556 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 VAPBO95292 243 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 MT-ND3P03897 115 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 MSL3P1P0C860 447 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 OGNP20774 298 aaKnown RBP23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 SHMT2P34897 504 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 MAGEA3P43357 314 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 CRADDP78560 199 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 HSD11B2P80365 405 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 ABHD18Q0P651 414 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 TMED2Q15363 201 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 PPP1R7Q15435 360 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 TYSND1Q2T9J0 566 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 HOOK3Q86VS8 718 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 SLC22A15Q8IZD6 547 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 NLGN4XQ8N0W4 816 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 D2HGDHQ8N465 521 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 SIDT2Q8NBJ9 832 aaKnown RBP23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 NLGN4YQ8NFZ3 816 aaPredicted RBP23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 NAT14Q8WUY8 206 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 MFSD3Q96ES6 412 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 SERPINB12Q96P63 405 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 P2RY12Q9H244 342 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 ASF1AQ9Y294 204 aa23.09■■□□□ 1.29
SSX2IP-209ENST00000603677 OR6C74A6NCV1 312 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 CCDC188H7C350 402 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 SLCO2B1O94956 709 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 PREPP48147 710 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 ARL4DP49703 201 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 SEMA3AQ14563 771 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 TMTC4Q5T4D3 741 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 DUS1LQ6P1R4 473 aaKnown RBP23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 FAM92BQ6ZTR7 304 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 AMIGO1Q86WK6 493 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 PPP1R3BQ86XI6 285 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 ESX1Q8N693 406 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 OR4E2Q8NGC2 313 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 GABPB2Q8TAK5 448 aaPredicted RBP23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 NAT9Q9BTE0 207 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 FAM117AQ9C073 453 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 CPNE5Q9HCH3 593 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 INTS10Q9NVR2 710 aaKnown RBP23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 OR6C2Q9NZP2 312 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 POMT2Q9UKY4 750 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 BTRCQ9Y297 605 aa23.08■■□□□ 1.29
SSX2IP-209ENST00000603677 USP27XA6NNY8 438 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 ZNF185O15231 689 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 KIF1CO43896 1103 aaKnown RBP23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 RAD1O60671 282 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 USP1O94782 785 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 TMEM63AO94886 807 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 ESR1P03372 595 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 ARNTP27540 789 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 CCR7P32248 378 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 PAFAH1B1P43034 410 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 ARCN1P48444 511 aaKnown RBP23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 FOXM1Q08050 763 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 PTK6Q13882 451 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 TGIF1Q15583 401 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 ARHGAP40Q5TG30 622 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 PTRHD1Q6GMV3 140 aaKnown RBP23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 CASC4Q6P4E1 433 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 UNC5DQ6UXZ4 953 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 CACNA2D3Q8IZS8 1091 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 IL22RA1Q8N6P7 574 aa23.07■■□□□ 1.28
SSX2IP-209ENST00000603677 OR52E1Q8NGJ3 308 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms