RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 MAGOHP61326 146 aaKnown RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 POU6F2P78424 691 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SCN1BQ07699 218 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NR1I3Q14994 352 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RPS6KA1Q15418 735 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ATAD3BQ5T9A4 648 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RIPPLY2Q5TAB7 128 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 AFMIDQ63HM1 303 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 KIAA0930Q6ICG6 404 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SERPINA13PQ6UXR4 307 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RNF44Q7L0R7 432 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 FBXO11Q86XK2 927 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MIB1Q86YT6 1006 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 HPS6Q86YV9 775 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CCDC103Q8IW40 242 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MAPKAPK5Q8IW41 473 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TOP6BLQ8N6T0 577 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 LPPQ93052 612 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ADIPOR1Q96A54 375 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TP53INP1Q96A56 240 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MAGOHBQ96A72 148 aaKnown RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ELP4Q96EB1 424 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NECTIN4Q96NY8 510 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CNPY3Q9BT09 278 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CPEB1Q9BZB8 566 aaKnown RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MFFQ9GZY8 342 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NARFLQ9H6Q4 476 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 POLR1BQ9H9Y6 1135 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SYBUQ9NX95 663 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TINAGQ9UJW2 476 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 DMRT1Q9Y5R6 373 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TAF6LQ9Y6J9 622 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CEPT1Q9Y6K0 416 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CRB1P82279 1406 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NPHP3-ACAD11A0A0J9YXS1 232 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF701M0R085 212 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RASGRF2O14827 1237 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 PCDH17O14917 1159 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NUAK1O60285 661 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CDH16O75309 829 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CCNDBP1O95273 360 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ADAMTS2O95450 1211 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 IL1R1P14778 569 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 UQCRBP14927 111 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ITPKAP23677 461 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CYP2F1P24903 491 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 PON1P27169 355 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 PDHA2P29803 388 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 HLA-FP30511 346 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CDH5P33151 784 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MCAMP43121 646 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CDC34P49427 236 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ARHGDIAP52565 204 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CAPZA1P52907 286 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 AP1S2P56377 157 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 IRF9Q00978 393 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CDR2Q01850 454 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RASGEF1BQ0VAM2 473 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ATP1A4Q13733 1029 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 KRT81Q14533 505 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 OXA1LQ15070 435 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ANGPT1Q15389 498 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TRIM16LQ309B1 348 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RAB41Q5JT25 222 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 HP1BP3Q5SSJ5 553 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF468Q5VIY5 522 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CDPF1Q6NVV7 123 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SHISA2Q6UWI4 295 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 UGT2A3Q6UWM9 527 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MSANTD1Q6ZTZ1 278 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ERASQ7Z444 233 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 PPP1R3BQ86XI6 285 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 DNAAF5Q86Y56 855 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 NRROSQ86YC3 692 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 METTL25Q8N6Q8 603 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 OR2T3Q8NH03 318 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SYTL5Q8TDW5 730 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 GLMPQ8WWB7 406 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CPT1BQ92523 772 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 STMN2Q93045 179 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MARC2Q969Z3 335 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM162AQ96A26 154 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ACDQ96AP0 544 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 RAD51AP1Q96B01 352 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SAT2Q96F10 170 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ALG14Q96F25 216 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC29A1Q99808 456 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 GDF15Q99988 308 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM79Q9BSE2 394 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 DSCC1Q9BVC3 393 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 MROQ9BYG7 248 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 C6orf62Q9GZU0 229 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF552Q9H707 407 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 GIMAP4Q9NUV9 329 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 CLEC5AQ9NY25 188 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 PDP1Q9P0J1 537 aaPredicted RBP4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 HIF3AQ9Y2N7 669 aa4.94□□□□□ -1.62
SPTBN1-206ENST00000602898 ZMYM6O95789 1325 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms