RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CPSF7Q8N684 471 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 KLHDC7BQ96G42 594 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 CCDC106Q9BWC9 280 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 REXO4Q9GZR2 422 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 ADPRHL2Q9NX46 363 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 ARHGEF9O43307 516 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 STC2O76061 302 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 OTCP00480 354 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 XRCC1P18887 633 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 NR4A1P22736 598 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 GTF2E2P29084 291 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 GALK1P51570 392 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 PRKAG1P54619 331 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 DEFA1P59665 94 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 DEFA3P59666 94 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 SFT2D3Q587I9 215 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 RBM20Q5T481 1227 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 ADAMTSL2Q86TH1 951 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 DGKBQ9Y6T7 804 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 IQCF5A8MTL0 148 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 TTC34A8MYJ7 566 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 SCNN1AP37088 669 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 ARRB1P49407 418 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 MRPL28Q13084 256 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 TSNQ15631 228 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 BROXQ5VW32 411 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 LHX8Q68G74 356 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 ZNF599Q96NL3 588 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 PCDHB11Q9Y5F2 797 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 COPG1Q9Y678 874 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 FGF3P11487 239 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 AFF1P51825 1210 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 LIPEQ05469 1076 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 EMC10Q5UCC4 262 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 GLYATQ6IB77 296 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 ZCCHC8Q6NZY4 707 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 TP53INP2Q8IXH6 220 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 CNTD1Q8N815 330 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 TTC29Q8NA56 475 aaPredicted RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 DGCR14Q96DF8 476 aaKnown RBP10.89□□□□□ -0.67
ZNF558-207ENST00000601372 SIGLEC10Q96LC7 697 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 KLF15Q9UIH9 416 aa10.89□□□□□ -0.67
ZNF558-207ENST00000601372 QSER1Q2KHR3 1735 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 LOC100506127A0A0U1RQW1 187 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SMIM31A0A1B0GVY4 71 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 OR4F21O95013 312 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SIX3O95343 332 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 CCR4P51679 360 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 ACSM2AQ08AH3 577 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 ACSM2BQ68CK6 577 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 CAPN13Q6MZZ7 669 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 EPGNQ6UW88 154 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 LRRTM3Q86VH5 581 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TCEAL4Q96EI5 215 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 HOPXQ9BPY8 73 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SLC2A4RGQ9NR83 387 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TMEM248Q9NWD8 314 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SSC5DA1L4H1 1573 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TMEM265A0A087WTH1 108 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 PRKCHP24723 683 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 HSPA7P48741 367 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 CGB2Q6NT52 195 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SPATA19Q7Z5L4 167 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 CNTN6Q9UQ52 1028 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 BBIP1A8MTZ0 92 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 ALOX12P18054 663 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 ATP6V0D1P61421 351 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 PTPRCAPQ14761 206 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TMEM25Q86YD3 366 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 BRSK1Q8TDC3 778 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 PTCD2Q8WV60 388 aaKnown RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 KBTBD7Q8WVZ9 684 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 PPP3R2Q96LZ3 170 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 NDEL1Q9GZM8 345 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 REEP1Q9H902 201 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 GDE1Q9NZC3 331 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TMEM98Q9Y2Y6 226 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 KCTD3Q9Y597 815 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 KCNE2Q9Y6J6 123 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 EVPLQ92817 2033 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 NPHS1O60500 1241 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SORBS2O94875 1100 aaKnown RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 CTSOP43234 321 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 MLLT6P55198 1093 aaPredicted RBP10.88□□□□□ -0.67
ZNF558-207ENST00000601372 MGAT3Q09327 533 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 DLG1Q12959 904 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 NDUFA9Q16795 377 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 SIRPB2Q5JXA9 342 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TCEAL8Q8IYN2 117 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 ZNF540Q8NDQ6 660 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 ALG2Q9H553 416 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 KLHL20Q9Y2M5 609 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 TPRKBQ9Y3C4 175 aa10.88□□□□□ -0.67
ZNF558-207ENST00000601372 GMPPBQ9Y5P6 360 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms