RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SLC25A23Q9BV35 468 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 NLNQ9BYT8 704 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 SRMSQ9H3Y6 488 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 SOHLH2Q9NX45 425 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 ZDHHC3Q9NYG2 299 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 DUSP10Q9Y6W6 482 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 H7C0S8 307 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 MATN2O00339 956 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 BTN3A1O00481 513 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 SORBS2O94875 1100 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 KLK3P07288 261 aaPredicted RBP17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 PRSS56P0CW18 603 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 RALBP11234 206 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 ITGALP20701 1170 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 CDH3P22223 829 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 HADHAP40939 763 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 UQCRFS1P47985 274 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 CD151P48509 253 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 PGDP52209 483 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 ITGA1P56199 1179 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 PRPSAP1Q14558 356 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 GPR33Q49SQ1 333 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 FAM198BQ6UWH4 519 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 ADGRF3Q8IZF5 1079 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 PHC3Q8NDX5 983 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 ALG3Q92685 438 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 DNAJC1Q96KC8 554 aaKnown RBP17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 TRAPPC9Q96Q05 1148 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 FERD3LQ96RJ6 166 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 TBL1YQ9BQ87 522 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 SYTL2Q9HCH5 934 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 ACSS2Q9NR19 701 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 TCFL5Q9UL49 500 aa17.46■□□□□ 0.39
CHMP2A-208ENST00000601220 PSMA3P25788 255 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 CTNNA2P26232 953 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 ACRV1P26436 265 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 MC4RP32245 332 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 PREPP48147 710 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 PRKAA1Q13131 559 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 KRT33BQ14525 404 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 CCDC181Q5TID7 509 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 ZNF385CQ66K41 422 aaPredicted RBP17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 DARS2Q6PI48 645 aaKnown RBP17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 SERPINA9Q86WD7 417 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 ZBTB2Q8N680 514 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 GALNT11Q8NCW6 608 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 OR52E1Q8NGJ3 308 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 CPT1CQ8TCG5 803 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 FEZ2Q9UHY8 353 aaPredicted RBP17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 MAP4K5Q9Y4K4 846 aa17.45■□□□□ 0.38
CHMP2A-208ENST00000601220 GSAPA4D1B5 854 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 BLACEA4D250 179 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 TTLL8A6PVC2 850 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 TMEM150CB9EJG8 249 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 CFAP99D6REC4 459 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 H3BMH7 237 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 TPBGLP0DKB5 382 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 PVRP15151 417 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 GNLYP22749 145 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 LMAN1P49257 510 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 RPA4Q13156 261 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 BOP1Q14137 746 aaKnown RBP17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 SPA17Q15506 151 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 CDHR3Q6ZTQ4 885 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 PIANPQ8IYJ0 282 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 CLDN19Q8N6F1 224 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 CLIP3Q96DZ5 547 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 XKR8Q9H6D3 395 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 MVB12BQ9H7P6 319 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 FANCEQ9HB96 536 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 NLE1Q9NVX2 485 aaPredicted RBP17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 SNX7Q9UNH6 387 aa17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 REXO2Q9Y3B8 237 aaKnown RBP17.44■□□□□ 0.38
CHMP2A-208ENST00000601220 TMEM63AO94886 807 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 METTL18O95568 372 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 TPH1P17752 444 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 GABRA4P48169 554 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 RWDD2BP57060 319 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 AMIGO1Q86WK6 493 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 SYTL1Q8IYJ3 562 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 LRRC57Q8N9N7 239 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 Q8NA96 180 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 GLIS1Q8NBF1 620 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 FDCSPQ8NFU4 85 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 FLVCR1-AS1Q8TAF5 88 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 TFGQ92734 400 aaPredicted RBP17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 CDKN2AIPNLQ96HQ2 116 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 PPP1R2P1Q96PQ5 205 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 FERMT1Q9BQL6 677 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 NUDT9Q9BW91 350 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 LACRTQ9GZZ8 138 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 KLHL25Q9H0H3 589 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 ICKQ9UPZ9 632 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 PCDHGB7Q9Y5F8 929 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 EPN1Q9Y6I3 576 aaPredicted RBP17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 PRSS21Q9Y6M0 314 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 PCSK5Q92824 1860 aa17.43■□□□□ 0.38
CHMP2A-208ENST00000601220 MACROD2A1Z1Q3 448 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms