RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FAM126AQ9BYI3 521 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 YTHDF1Q9BYJ9 559 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 TOR3AQ9H497 397 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 PLGRKTQ9HBL7 147 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 WWOXQ9NZC7 414 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 TRPM5Q9NZQ8 1165 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 ADGRE2Q9UHX3 823 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 OARD1Q9Y530 152 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 TBKBP1A7MCY6 615 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 G3V2T6 193 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 MATN1P21941 496 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 GKP32189 559 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 TUFMP49411 452 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 CYP4F3Q08477 520 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 PPP1R8Q12972 351 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 PLD1Q13393 1074 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 TCTN1Q2MV58 587 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 ARMC12Q5T9G4 340 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 ANKRD34AQ69YU3 496 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 SLC8B1Q6J4K2 584 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 ZNF773Q6PK81 442 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 MBOAT1Q6ZNC8 495 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 ZDHHC13Q8IUH4 622 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 CLHC1Q8NHS4 586 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 FNDC8Q8TC99 324 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 CCDC115Q96NT0 180 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 ZBTB18Q99592 522 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 KLF16Q9BXK1 252 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 GORASP2Q9H8Y8 452 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 FANCEQ9HB96 536 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 OPTCQ9UBM4 332 aa19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 EIF3LQ9Y262 564 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-225ENST00000600733 C1orf232A0A0U1RR37 186 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 GOLGA8CPA6NN73 597 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 A8MX80 341 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 RGS14O43566 566 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 NOBOXO60393 691 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 PGLSO95336 258 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 IL7RP16871 459 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 AKT1P31749 480 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 RGS4P49798 205 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 NFATC2Q13469 925 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 ANKDD1AQ495B1 522 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 GTDC1Q4AE62 458 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 INO80DQ53TQ3 878 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 SULT1C3Q6IMI6 304 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 FAM117BQ6P1L5 589 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 CD244Q9BZW8 370 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 DPY30Q9C005 99 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 ADNPQ9H2P0 1102 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 GNPTGQ9UJJ9 305 aa19.83■□□□□ 0.77
SHKBP1-225ENST00000600733 A0A1W2PQ45 241 aaPredicted RBP19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 A0A1W2PQY0 241 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 CPNE6O95741 557 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 CST1P01037 141 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 CSKP41240 450 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 SUSD1Q6UWL2 747 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 ZBTB46Q86UZ6 589 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 RBFAQ8N0V3 343 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC22A17Q8WUG5 538 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 OVCA2Q8WZ82 227 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 UGT2B28Q9BY64 529 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 ZFYVE1Q9HBF4 777 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 IL26Q9NPH9 171 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC6A13Q9NSD5 602 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 ZNF490Q9ULM2 529 aaPredicted RBP19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 GMEB1Q9Y692 573 aa19.83■□□□□ 0.76
SHKBP1-225ENST00000600733 SMAD6O43541 496 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 ULK1O75385 1050 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 SEC22BO75396 215 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 PGRP06401 933 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 SELPP16109 830 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 XKR5Q6UX68 686 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 PHACTR4Q8IZ21 702 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 RGL4Q8IZJ4 473 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 PAF1Q8N7H5 531 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 OR13F1Q8NGS4 319 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 PNPT1Q8TCS8 783 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 RHBDF1Q96CC6 855 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 MTFMTQ96DP5 389 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 STARD7Q9NQZ5 370 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 MTRRQ9UBK8 725 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 ZNHIT2Q9UHR6 403 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 LOC730098B7Z3J9 87 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 CLDN7O95471 211 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 MBL2P11226 248 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 MSH3P20585 1137 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 RPS3P23396 243 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 DGKAP23743 735 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 PIGAP37287 484 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 BNIP3Q12983 259 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 DUS1LQ6P1R4 473 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 NECAB2Q7Z6G3 386 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 THAP5Q7Z6K1 395 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 CROCCP3Q8IVE0 287 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 AADATQ8N5Z0 425 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 SLC47A1Q96FL8 570 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 PCDHGA8Q9Y5G5 932 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 OR51B4Q9Y5P0 310 aa19.82■□□□□ 0.76
SHKBP1-225ENST00000600733 CASP8AP2Q9UKL3 1982 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms